ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364915.1 ENST00000364915.1_1_76_+ 1–76 7082.00 26.51 9.34 66.71 SNORD117-201 snoRNA thyroid gland (Tissue)
ENST00000364915.1 ENST00000364915.1_2_74_+ 2–74 6427.00 24.06 8.48 47.58 SNORD117-201 snoRNA thyroid gland (Tissue)
ENST00000364969.1 ENST00000364969.1_4_62_+ 4–62 8832.00 2.42 11.65 100.0 SNORD114-3-201 snoRNA thyroid gland (Tissue)
ENST00000364969.1 ENST00000364969.1_38_71_+ 38–71 10964.00 3.01 14.46 100.0 SNORD114-3-201 snoRNA thyroid gland (Tissue)
ENST00000364969.1 ENST00000364969.1_3_71_+ 3–71 303669.00 83.34 400.56 94.96 SNORD114-3-201 snoRNA thyroid gland (Tissue)
ENST00000364991.1 ENST00000364991.1_17_30_+ 17–30 56.00 1.11 0.07 100.0 RNA5SP298-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000365037.1 ENST00000365037.1_2_82_+ 2–82 477.00 41.41 0.63 100.0 SNORD115-38-201 snoRNA thyroid gland (Tissue)
ENST00000365073.1 ENST00000365073.1_2_81_+ 2–81 316.00 28.21 0.42 100.0 SNORD115-10-201 snoRNA thyroid gland (Tissue)
ENST00000365080.1 ENST00000365080.1_3_67_+ 3–67 143698.00 81.98 189.55 100.0 SNORD113-9-201 snoRNA thyroid gland (Tissue)
ENST00000365099.1 ENST00000365099.1_2_82_+ 2–82 15.00 13.04 0.02 100.0 SNORD115-20-201 snoRNA thyroid gland (Tissue)
ENST00000365161.1 ENST00000365161.1_1_38_+ 1–38 1314.00 2.35 1.73 100.0 SNORD38A-201 snoRNA thyroid gland (Tissue)
ENST00000365161.1 ENST00000365161.1_1_41_+ 1–41 1045.00 1.87 1.38 100.0 SNORD38A-201 snoRNA thyroid gland (Tissue)
ENST00000365161.1 ENST00000365161.1_1_68_+ 1–68 49827.00 89.04 65.73 100.0 SNORD38A-201 snoRNA thyroid gland (Tissue)
ENST00000365178.1 ENST00000365178.1_4_67_+ 4–67 324655.00 91.01 428.24 96.49 SNORD114-20-201 snoRNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_1_76_+ 1–76 424.00 5.09 0.56 100.0 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_270_331_+ 270–331 671.00 8.06 0.89 74.39 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_246_331_+ 246–331 319.00 3.83 0.42 100.0 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_273_331_+ 273–331 462.00 5.55 0.61 75.37 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_260_331_+ 260–331 192.00 2.31 0.25 100.0 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_1_63_+ 1–63 132.00 1.59 0.17 40.74 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_282_331_+ 282–331 12.00 0.14 0.02 100.0 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_277_331_+ 277–331 736.00 8.84 0.97 82.98 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365328.1 ENST00000365328.1_238_331_+ 238–331 760.00 9.13 1.00 100.0 7SK.1-201 misc RNA thyroid gland (Tissue)
ENST00000365382.1 ENST00000365382.1_1_88_+ 1–88 6317.00 49.78 8.33 100.0 SNORD14C-201 snoRNA thyroid gland (Tissue)
ENST00000365391.1 ENST00000365391.1_2_82_+ 2–82 550.00 46.14 0.73 100.0 SNORD115-44-201 snoRNA thyroid gland (Tissue)