ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362883.1 ENST00000362883.1_35_70_+ 35–70 4093.00 16.65 5.40 100.0 SNORD104-201 snoRNA thyroid gland (Tissue)
ENST00000362912.1 ENST00000362912.1_2_82_+ 2–82 620.00 42.21 0.82 95.09 SNORD115-9-201 snoRNA thyroid gland (Tissue)
ENST00000362973.1 ENST00000362973.1_96_117_+ 96–117 5887.00 39.21 7.77 78.55 RNA5SP358-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000363124.1 ENST00000363124.1_17_32_+ 17–32 270.00 2.53 0.36 82.82 RNA5SP145-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000363182.1 ENST00000363182.1_1_32_+ 1–32 64.00 22.78 0.08 100.0 Y_RNA.105-201 misc RNA thyroid gland (Tissue)
ENST00000363194.1 ENST00000363194.1_1_32_+ 1–32 502.00 12.83 0.66 100.0 RNY4P9-201 misc RNA thyroid gland (Tissue)
ENST00000363286.1 ENST00000363286.1_63_116_+ 63–116 4665.00 11.41 6.15 100.0 RNU5B-1-201 snRNA thyroid gland (Tissue)
ENST00000363286.1 ENST00000363286.1_68_116_+ 68–116 1321.00 3.23 1.74 100.0 RNU5B-1-201 snRNA thyroid gland (Tissue)
ENST00000363286.1 ENST00000363286.1_55_116_+ 55–116 4308.00 10.54 5.68 100.0 RNU5B-1-201 snRNA thyroid gland (Tissue)
ENST00000363286.1 ENST00000363286.1_1_78_+ 1–78 1861.00 4.55 2.45 65.32 RNU5B-1-201 snRNA thyroid gland (Tissue)
ENST00000363286.1 ENST00000363286.1_1_69_+ 1–69 221.00 0.54 0.29 100.0 RNU5B-1-201 snRNA thyroid gland (Tissue)
ENST00000363286.1 ENST00000363286.1_1_86_+ 1–86 872.00 2.13 1.15 100.0 RNU5B-1-201 snRNA thyroid gland (Tissue)
ENST00000363293.1 ENST00000363293.1_2_82_+ 2–82 1379.00 83.22 1.82 96.64 SNORD115-18-201 snoRNA thyroid gland (Tissue)
ENST00000363341.1 ENST00000363341.1_1_32_+ 1–32 9287.00 51.26 12.25 97.1 RNY4P27-201 misc RNA thyroid gland (Tissue)
ENST00000363341.1 ENST00000363341.1_1_36_+ 1–36 419.00 2.31 0.55 60.2 RNY4P27-201 misc RNA thyroid gland (Tissue)
ENST00000363444.1 ENST00000363444.1_74_99_+ 74–99 1930.00 16.70 2.55 100.0 Y_RNA.136-201 misc RNA thyroid gland (Tissue)
ENST00000363608.1 ENST00000363608.1_2_82_+ 2–82 353.00 31.38 0.47 100.0 SNORD115-41-201 snoRNA thyroid gland (Tissue)
ENST00000363633.1 ENST00000363633.1_2_82_+ 2–82 108.00 11.20 0.14 100.0 SNORD115-5-201 snoRNA thyroid gland (Tissue)
ENST00000363723.1 ENST00000363723.1_2_82_+ 2–82 308.00 39.29 0.41 100.0 SNORD115-33-201 snoRNA thyroid gland (Tissue)
ENST00000363742.1 ENST00000363742.1_4_67_+ 4–67 296550.00 95.31 391.17 99.11 SNORD114-25-201 snoRNA thyroid gland (Tissue)
ENST00000363762.1 ENST00000363762.1_3_72_+ 3–72 682823.00 95.55 900.69 100.0 SNORD113-7-201 snoRNA thyroid gland (Tissue)
ENST00000363856.1 ENST00000363856.1_2_82_+ 2–82 115.00 15.67 0.15 100.0 SNORD115-8-201 snoRNA thyroid gland (Tissue)
ENST00000363872.1 ENST00000363872.1_74_98_+ 74–98 1318.00 33.82 1.74 100.0 Y_RNA.181-201 misc RNA thyroid gland (Tissue)
ENST00000363887.1 ENST00000363887.1_2_82_+ 2–82 429.00 33.99 0.57 100.0 SNORD115-16-201 snoRNA thyroid gland (Tissue)
ENST00000364079.1 ENST00000364079.1_2_82_+ 2–82 224.00 37.97 0.30 100.0 SNORD115-32-201 snoRNA thyroid gland (Tissue)