ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 1473.00 34.69 1.94 100.0 Y_RNA.14-201 misc RNA thyroid gland (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 308.00 27.52 0.41 100.0 SNORD115-34-201 snoRNA thyroid gland (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 1038.00 25.03 1.37 100.0 RNU5E-1-201 snRNA thyroid gland (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 7.00 3.40 0.01 100.0 SNORA31-201 snoRNA thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 5.00 0.05 0.01 100.0 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 17.00 0.16 0.02 94.44 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 6.00 0.06 0.01 75.0 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 1.00 0.01 0.00 100.0 RNA5SP389-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 2154.00 1.89 2.84 100.0 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 16387.00 14.35 21.62 75.96 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 10500.94 9.19 13.85 37.23 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 6503.00 5.69 8.58 79.92 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 4342.00 3.80 5.73 59.31 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 485.00 0.42 0.64 100.0 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 1261.00 1.10 1.66 38.2 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 7500.00 6.57 9.89 45.57 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 1734.34 1.52 2.29 49.69 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 3804.00 3.33 5.02 53.35 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 7226.00 6.33 9.53 76.11 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 1484.00 1.30 1.96 100.0 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 18647.87 16.32 24.60 69.99 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 1779.61 1.56 2.35 37.04 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 2987.00 2.61 3.94 87.03 RNU5A-1-201 snRNA thyroid gland (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 26370.00 70.10 34.78 100.0 SNORD114-14-201 snoRNA thyroid gland (Tissue)
ENST00000362883.1 ENST00000362883.1_10_70_+ 10–70 1331.00 5.41 1.76 100.0 SNORD104-201 snoRNA thyroid gland (Tissue)