ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000364117.1 ENST00000364117.1_2_82_+ 2–82 234.00 37.26 0.31 100.0 SNORD115-30-201 snoRNA thyroid gland (Tissue)
ENST00000364228.1 ENST00000364228.1_1_32_+ 1–32 3679.73 17.45 4.85 71.66 RNY1-201 misc RNA thyroid gland (Tissue)
ENST00000364228.1 ENST00000364228.1_24_109_+ 24–109 3649.00 17.31 4.81 100.0 RNY1-201 misc RNA thyroid gland (Tissue)
ENST00000364228.1 ENST00000364228.1_1_30_+ 1–30 1003.67 4.76 1.32 27.39 RNY1-201 misc RNA thyroid gland (Tissue)
ENST00000364228.1 ENST00000364228.1_1_63_+ 1–63 158.00 0.75 0.21 100.0 RNY1-201 misc RNA thyroid gland (Tissue)
ENST00000364228.1 ENST00000364228.1_1_39_+ 1–39 322.00 1.53 0.42 100.0 RNY1-201 misc RNA thyroid gland (Tissue)
ENST00000364273.1 ENST00000364273.1_2_82_+ 2–82 139.00 15.43 0.18 100.0 SNORD115-42-201 snoRNA thyroid gland (Tissue)
ENST00000364315.1 ENST00000364315.1_35_95_+ 35–95 50.70 0.23 0.07 55.71 RNA5SP202-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364315.1 ENST00000364315.1_87_119_+ 87–119 441.00 2.01 0.58 100.0 RNA5SP202-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364315.1 ENST00000364315.1_71_95_+ 71–95 5.00 0.02 0.01 100.0 RNA5SP202-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364315.1 ENST00000364315.1_52_119_+ 52–119 16.00 0.07 0.02 100.0 RNA5SP202-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364315.1 ENST00000364315.1_37_95_+ 37–95 28.79 0.13 0.04 33.87 RNA5SP202-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364315.1 ENST00000364315.1_83_119_+ 83–119 495.00 2.26 0.65 100.0 RNA5SP202-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364315.1 ENST00000364315.1_101_119_+ 101–119 2625.27 11.98 3.46 43.55 RNA5SP202-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364315.1 ENST00000364315.1_62_119_+ 62–119 70.00 0.32 0.09 100.0 RNA5SP202-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364370.1 ENST00000364370.1_4_67_+ 4–67 121036.00 42.70 159.65 100.0 SNORD114-9-201 snoRNA thyroid gland (Tissue)
ENST00000364370.1 ENST00000364370.1_35_67_+ 35–67 130799.00 46.15 172.53 100.0 SNORD114-9-201 snoRNA thyroid gland (Tissue)
ENST00000364409.1 ENST00000364409.1_68_90_+ 68–90 2205.00 9.86 2.91 100.0 Y_RNA.234-201 misc RNA thyroid gland (Tissue)
ENST00000364461.1 ENST00000364461.1_2_82_+ 2–82 193.00 52.73 0.25 100.0 SNORD115-23-201 snoRNA thyroid gland (Tissue)
ENST00000364543.1 ENST00000364543.1_1_39_+ 1–39 10.00 0.17 0.01 100.0 RNA5SP141-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000364687.1 ENST00000364687.1_34_67_+ 34–67 9186.00 38.13 12.12 100.0 SNORD114-15-201 snoRNA thyroid gland (Tissue)
ENST00000364722.1 ENST00000364722.1_2_30_+ 2–30 882.00 38.91 1.16 100.0 ENST00000364722 snoRNA thyroid gland (Tissue)
ENST00000364809.1 ENST00000364809.1_2_81_+ 2–81 213.00 21.41 0.28 100.0 SNORD115-15-201 snoRNA thyroid gland (Tissue)
ENST00000364830.3 ENST00000364830.3_3_67_+ 3–67 9129.00 37.22 12.04 100.0 SNORD113-3-201 snoRNA thyroid gland (Tissue)
ENST00000364884.1 ENST00000364884.1_1_66_+ 1–66 31899.00 42.74 42.08 100.0 SNORD52-201 snoRNA thyroid gland (Tissue)