ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 99198.00 4.43 130.85 94.4 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 324054.00 14.46 427.45 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 2979.00 0.13 3.93 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 10372.00 0.46 13.68 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 52339.00 2.34 69.04 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 586.00 0.03 0.77 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 756.00 8.96 1.00 100.0 FTX-219 lncRNA thyroid gland (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 4865.00 57.66 6.42 81.78 FTX-219 lncRNA thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 2411.00 10.96 3.18 84.01 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 571.00 2.60 0.75 66.63 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 3254.00 14.80 4.29 66.3 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 459.00 2.09 0.61 15.99 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 3579.00 16.27 4.72 85.95 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 182.00 0.83 0.24 100.0 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 681.00 3.10 0.90 100.0 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 996.00 4.53 1.31 100.0 CTC1-214 protein coding thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 9859.00 5.21 13.00 74.54 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1300.00 0.69 1.71 98.63 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 4325.00 2.29 5.70 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 11969.00 6.33 15.79 50.17 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 4891.00 2.59 6.45 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 4630.00 2.45 6.11 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1018.00 0.54 1.34 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 2149.00 1.14 2.83 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 3126.00 1.65 4.12 100.0 ENST00000651540 lncRNA thyroid gland (Tissue)