ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 4239.00 2.87 5.59 70.0 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 3969.00 2.69 5.24 65.84 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 2781.12 23.06 3.67 68.0 5S_rRNA.20-201 rRNA pseudogene thyroid gland (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 1608.00 3.81 2.12 100.0 HSPA9-211 retained intron thyroid gland (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 12462.00 29.54 16.44 55.58 HSPA9-211 retained intron thyroid gland (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 230375.00 83.99 303.88 100.0 DNM3OS-205 lncRNA thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 57109.00 2.55 75.33 87.56 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 725.00 0.03 0.96 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 4648.00 0.21 6.13 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 2083.00 0.09 2.75 73.27 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 18028.00 0.80 23.78 93.49 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 210.00 0.01 0.28 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 244.00 0.01 0.32 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 630.00 0.03 0.83 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1302497.00 58.13 1718.08 99.84 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 3805.00 0.17 5.02 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 7539.00 0.34 9.94 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1765.00 0.08 2.33 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1805.00 0.08 2.38 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 2745.00 0.12 3.62 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1001.00 0.04 1.32 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 930.00 0.04 1.23 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1539.00 0.07 2.03 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 152230.00 6.79 200.80 100.0 GAS5-230 retained intron thyroid gland (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 92777.00 4.14 122.38 100.0 GAS5-230 retained intron thyroid gland (Tissue)