ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 26317.88 9.31 34.72 46.02 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 34556.31 12.23 45.58 58.69 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 4865.00 1.75 6.42 100.0 U2.6-201 snRNA thyroid gland (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 2749.00 0.67 3.63 35.13 ENST00000619323 lncRNA thyroid gland (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 398825.00 96.59 526.08 98.28 ENST00000619323 lncRNA thyroid gland (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 305.00 12.60 0.40 100.0 SCARNA4-202 scaRNA thyroid gland (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 5046.00 75.17 6.66 100.0 ENST00000625572 miRNA thyroid gland (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 122201.00 93.74 161.19 100.0 ENST00000628177 snoRNA thyroid gland (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 4057.00 88.95 5.35 100.0 ENST00000630615 snoRNA thyroid gland (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 630.00 25.85 0.83 100.0 DMRT2-209 protein coding thyroid gland (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 885.00 36.32 1.17 100.0 DMRT2-209 protein coding thyroid gland (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 3540.00 38.84 4.67 100.0 SNORD98-201 snoRNA thyroid gland (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 3598.00 39.48 4.75 100.0 SNORD98-201 snoRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 217871.13 53.97 287.39 60.05 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 4445.21 1.10 5.86 39.12 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 576.00 0.14 0.76 100.0 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 6378.03 1.58 8.41 56.13 MIR106AHG-201 lncRNA thyroid gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 7059.00 15.71 9.31 100.0 MEG8-222 lncRNA thyroid gland (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 13862.00 30.86 18.28 100.0 MEG8-222 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 11506.00 7.79 15.18 96.13 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 58546.00 39.65 77.23 91.87 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 19383.00 13.13 25.57 100.0 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 13816.00 9.36 18.22 91.01 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 415.00 0.28 0.55 100.0 SNHG14-224 lncRNA thyroid gland (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 3493.00 2.37 4.61 49.95 SNHG14-224 lncRNA thyroid gland (Tissue)