ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 2639.00 1.03 3.48 100.0 NOP56-219 retained intron thyroid gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 3649.00 1.42 4.81 100.0 NOP56-219 retained intron thyroid gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 73531.00 28.65 96.99 76.34 NOP56-219 retained intron thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 4054.00 12.89 5.35 44.38 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 73.88 0.23 0.10 56.83 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 5.00 0.02 0.01 100.0 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_25_+ 1–25 1687.00 5.36 2.23 100.0 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_10_37_+ 10–37 464.00 1.48 0.61 100.0 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_1_81_+ 1–81 6897.00 21.93 9.10 62.98 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000612463.1 ENST00000612463.1_83_123_+ 83–123 75.58 0.24 0.10 58.14 RNA5-8SN2-201 rRNA thyroid gland (Tissue)
ENST00000615835.1 ENST00000615835.1_56_79_+ 56–79 8.00 88.89 0.01 100.0 MIR7974-201 miRNA thyroid gland (Tissue)
ENST00000616574.2 ENST00000616574.2_44_64_+ 44–64 2330.00 23.80 3.07 100.0 MIR376A1-201 miRNA thyroid gland (Tissue)
ENST00000616574.2 ENST00000616574.2_7_27_+ 7–27 3792.00 38.73 5.00 100.0 MIR376A1-201 miRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_155_187_+ 155–187 1883.00 0.67 2.48 100.0 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_93_187_+ 93–187 1355.00 0.48 1.79 31.71 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_95_+ 1–95 113914.00 40.30 150.26 93.43 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_99_187_+ 99–187 6.00 0.00 0.01 100.0 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_87_+ 1–87 29608.00 10.48 39.05 67.92 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_64_+ 1–64 10092.00 3.57 13.31 57.59 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_70_+ 1–70 4927.00 1.74 6.50 44.16 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_95_188_+ 95–188 3087.90 1.09 4.07 72.27 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_170_188_+ 170–188 100.00 0.04 0.13 100.0 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_93_116_+ 93–116 10.00 0.00 0.01 100.0 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_1_75_+ 1–75 147.00 0.05 0.19 100.0 U2.3-201 snRNA thyroid gland (Tissue)
ENST00000617785.1 ENST00000617785.1_22_116_+ 22–116 375.00 0.13 0.49 100.0 U2.3-201 snRNA thyroid gland (Tissue)