ENCFF001RMT

Library Details

Organism: Homo Sapiens
Biosample: thyroid gland (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGE
Description: Part of ENCODE experiment ENCSR000AGE. The libraries contained in this experiment come from human fetal thyroid gland tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 1707880.25 83.03 2252.81 87.63 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_320_+ 236–320 322814.06 15.69 425.81 15.94 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_330_+ 236–330 4948.00 0.24 6.53 86.5 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_236_276_+ 236–276 237.00 0.01 0.31 100.0 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000595794.5 ENST00000595794.5_230_318_+ 230–318 35.00 0.00 0.05 100.0 C19orf48P-203 retained intron thyroid gland (Tissue)
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 97.00 78.23 0.13 100.0 ENST00000597420 lncRNA thyroid gland (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 178.00 2.84 0.23 100.0 RPS11-206 retained intron thyroid gland (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 5444.00 86.92 7.18 100.0 RPS11-206 retained intron thyroid gland (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 611930.00 44.58 807.18 47.12 CARMN-209 lncRNA thyroid gland (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1991.00 28.89 2.63 100.0 ENST00000602478 lncRNA thyroid gland (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 12.00 40.00 0.02 100.0 PPFIA1P1-201 processed pseudogene thyroid gland (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 57416.00 58.19 75.74 100.0 SNORD114-21-201 snoRNA thyroid gland (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 19892.00 20.16 26.24 100.0 SNORD114-21-201 snoRNA thyroid gland (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 227.00 23.92 0.30 100.0 SNORD115-40-201 snoRNA thyroid gland (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 63210.00 98.28 83.38 100.0 MIR98-201 miRNA thyroid gland (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 281125.00 96.91 370.82 100.0 SNORD113-5-201 snoRNA thyroid gland (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 9189.00 94.50 12.12 100.0 MIR15A-201 miRNA thyroid gland (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 23699.00 85.09 31.26 100.0 MIR376C-201 miRNA thyroid gland (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 5186.00 56.47 6.84 100.0 SNHG21-206 retained intron thyroid gland (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 130.00 7.69 0.17 100.0 SNORD11B-201 snoRNA thyroid gland (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 11206.00 66.93 14.78 100.0 SNORD91B-201 snoRNA thyroid gland (Tissue)
ENST00000608502.2 ENST00000608502.2_858_879_+ 858–879 7.00 16.28 0.01 100.0 MIR219A2HG-201 lncRNA thyroid gland (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 22580.00 46.66 29.78 65.43 SNORD91A-201 snoRNA thyroid gland (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 186230.00 47.90 245.65 98.5 MIR486-1-201 miRNA thyroid gland (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 97814.00 38.11 129.02 71.48 NOP56-219 retained intron thyroid gland (Tissue)