ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362415.1 ENST00000362415.1_74_100_+ 74–100 16166.00 71.19 33.52 100.0 Y_RNA.14-201 misc RNA diencephalon (Tissue)
ENST00000362441.1 ENST00000362441.1_2_82_+ 2–82 36923.00 28.15 76.56 100.0 SNORD115-34-201 snoRNA diencephalon (Tissue)
ENST00000362477.1 ENST00000362477.1_70_120_+ 70–120 896.00 30.56 1.86 100.0 RNU5E-1-201 snRNA diencephalon (Tissue)
ENST00000362545.1 ENST00000362545.1_1_85_+ 1–85 2.00 0.04 0.00 2.17 RNA5SP370-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362607.1 ENST00000362607.1_1_25_+ 1–25 11.00 9.09 0.02 100.0 SNORA31-201 snoRNA diencephalon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_53_+ 1–53 87.00 1.76 0.18 92.55 RNA5SP389-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_76_+ 1–76 17.00 0.34 0.04 100.0 RNA5SP389-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_42_+ 1–42 187.00 3.78 0.39 86.57 RNA5SP389-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362610.1 ENST00000362610.1_1_70_+ 1–70 1.00 0.02 0.00 100.0 RNA5SP389-201 rRNA pseudogene diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_72_116_+ 72–116 652.00 1.73 1.35 100.0 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_60_116_+ 60–116 4149.00 10.98 8.60 75.37 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_66_116_+ 66–116 6060.25 16.04 12.57 42.21 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_29_116_+ 29–116 1629.00 4.31 3.38 75.28 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_47_116_+ 47–116 766.00 2.03 1.59 76.37 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_55_116_+ 55–116 848.00 2.24 1.76 58.73 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_40_116_+ 40–116 66.00 0.17 0.14 100.0 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_36_116_+ 36–116 185.00 0.49 0.38 32.98 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_63_116_+ 63–116 2084.00 5.52 4.32 41.43 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_22_116_+ 22–116 424.90 1.12 0.88 53.72 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_52_116_+ 52–116 635.00 1.68 1.32 50.48 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_1_78_+ 1–78 746.00 1.97 1.55 100.0 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_68_116_+ 68–116 9105.74 24.10 18.88 66.37 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_24_116_+ 24–116 338.25 0.90 0.70 32.65 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362698.1 ENST00000362698.1_34_116_+ 34–116 561.00 1.48 1.16 92.42 RNU5A-1-201 snRNA diencephalon (Tissue)
ENST00000362723.1 ENST00000362723.1_3_71_+ 3–71 9969.00 84.81 20.67 100.0 SNORD114-14-201 snoRNA diencephalon (Tissue)