ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000362283.1 ENST00000362283.1_6_29_+ 6–29 7168.00 82.97 14.86 98.23 MIR30D-201 miRNA diencephalon (Tissue)
ENST00000362283.1 ENST00000362283.1_6_25_+ 6–25 845.00 9.78 1.75 86.76 MIR30D-201 miRNA diencephalon (Tissue)
ENST00000362291.1 ENST00000362291.1_15_35_+ 15–35 36132.00 74.11 74.92 100.0 MIR126-201 miRNA diencephalon (Tissue)
ENST00000362291.1 ENST00000362291.1_52_73_+ 52–73 10918.00 22.39 22.64 94.15 MIR126-201 miRNA diencephalon (Tissue)
ENST00000362298.3 ENST00000362298.3_42_63_+ 42–63 391.00 29.24 0.81 100.0 MIR374A-201 miRNA diencephalon (Tissue)
ENST00000362307.1 ENST00000362307.1_8_29_+ 8–29 268.00 77.23 0.56 100.0 MIR31-201 miRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_49_+ 1–49 49.00 0.13 0.10 87.5 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_58_+ 1–58 21.00 0.06 0.04 100.0 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_26_95_+ 26–95 15.00 0.04 0.03 16.48 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_14_32_+ 14–32 14.00 0.04 0.03 100.0 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_15_95_+ 15–95 270.10 0.72 0.56 60.02 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_83_+ 1–83 90.00 0.24 0.19 97.83 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_20_95_+ 20–95 168.00 0.45 0.35 58.54 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_32_+ 1–32 34.00 0.09 0.07 77.27 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_58_95_+ 58–95 226.43 0.60 0.47 53.78 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_17_95_+ 17–95 244.57 0.65 0.51 48.82 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_79_95_+ 79–95 20.00 0.05 0.04 86.96 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_12_95_+ 12–95 134.00 0.36 0.28 66.01 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_56_95_+ 56–95 361.30 0.96 0.75 51.61 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_32_95_+ 32–95 116.00 0.31 0.24 78.91 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_45_+ 1–45 122.00 0.32 0.25 100.0 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_23_95_+ 23–95 215.00 0.57 0.45 74.39 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_5_95_+ 5–95 1188.00 3.15 2.46 98.67 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_83_95_+ 83–95 170.00 0.45 0.35 98.27 RNA5S12-201 rRNA diencephalon (Tissue)
ENST00000362400.1 ENST00000362400.1_1_95_+ 1–95 7553.00 20.05 15.66 99.79 RNA5S12-201 rRNA diencephalon (Tissue)