ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000756336.1 ENST00000756336.1_98_130_+ 98–130 4618.41 31.90 9.58 68.16 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_107_172_+ 107–172 152.15 1.05 0.32 22.51 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_125_+ 98–125 296.25 2.05 0.61 45.79 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_172_+ 98–172 628.00 4.34 1.30 100.0 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_109_172_+ 109–172 990.27 6.84 2.05 89.46 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756452.1 ENST00000756452.1_116_129_+ 116–129 2543.00 94.47 5.27 100.0 ENST00000756452 lncRNA diencephalon (Tissue)
ENST00000760093.1 ENST00000760093.1_80_108_+ 80–108 895.00 33.56 1.86 100.0 ENST00000760093 lncRNA diencephalon (Tissue)
ENST00000760093.1 ENST00000760093.1_77_108_+ 77–108 90.00 3.37 0.19 100.0 ENST00000760093 lncRNA diencephalon (Tissue)
ENST00000760397.1 ENST00000760397.1_331_421_+ 331–421 647874.00 89.82 1343.37 94.5 SNHG14-356 lncRNA diencephalon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_354_+ 325–354 1531.00 9.97 3.17 63.71 LINC02806-241 lncRNA diencephalon (Tissue)
ENST00000762395.1 ENST00000762395.1_325_377_+ 325–377 277.00 1.80 0.57 100.0 LINC02806-241 lncRNA diencephalon (Tissue)
ENST00000762395.1 ENST00000762395.1_397_430_+ 397–430 1.00 0.01 0.00 100.0 LINC02806-241 lncRNA diencephalon (Tissue)
ENST00000762395.1 ENST00000762395.1_324_357_+ 324–357 7620.00 49.62 15.80 85.5 LINC02806-241 lncRNA diencephalon (Tissue)
ENST00000766977.1 ENST00000766977.1_604_615_+ 604–615 514.00 56.86 1.07 100.0 EHBP1-AS1-210 lncRNA diencephalon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_437_+ 425–437 39.00 6.88 0.08 100.0 ENST00000770398 lncRNA diencephalon (Tissue)
ENST00000770398.1 ENST00000770398.1_481_509_+ 481–509 239.00 42.15 0.50 100.0 ENST00000770398 lncRNA diencephalon (Tissue)
ENST00000770398.1 ENST00000770398.1_425_456_+ 425–456 78.00 13.76 0.16 100.0 ENST00000770398 lncRNA diencephalon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1611_+ 1591–1611 50.00 0.23 0.10 100.0 ENST00000771298 lncRNA diencephalon (Tissue)
ENST00000771298.1 ENST00000771298.1_448_479_+ 448–479 2.00 0.01 0.00 100.0 ENST00000771298 lncRNA diencephalon (Tissue)
ENST00000771298.1 ENST00000771298.1_1591_1621_+ 1591–1621 14578.00 67.92 30.23 91.28 ENST00000771298 lncRNA diencephalon (Tissue)
ENST00000771298.1 ENST00000771298.1_485_522_+ 485–522 14.00 0.07 0.03 100.0 ENST00000771298 lncRNA diencephalon (Tissue)
ENST00000772672.1 ENST00000772672.1_26_113_+ 26–113 2772.00 43.97 5.75 100.0 ENST00000772672 lncRNA diencephalon (Tissue)
ENST00000772672.1 ENST00000772672.1_21_113_+ 21–113 3.00 0.05 0.01 100.0 ENST00000772672 lncRNA diencephalon (Tissue)
ENST00000772672.1 ENST00000772672.1_91_113_+ 91–113 48.00 0.76 0.10 100.0 ENST00000772672 lncRNA diencephalon (Tissue)
ENST00000773843.1 ENST00000773843.1_422_435_+ 422–435 561.00 54.73 1.16 100.0 ENST00000773843 lncRNA diencephalon (Tissue)