ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000726427.1 ENST00000726427.1_819_841_+ 819–841 2579.00 68.35 5.35 100.0 MIR34BHG-202 lncRNA diencephalon (Tissue)
ENST00000730292.1 ENST00000730292.1_241_262_+ 241–262 73985.00 81.56 153.41 86.02 THBS3-AS1-228 lncRNA diencephalon (Tissue)
ENST00000732834.1 ENST00000732834.1_2132_2152_+ 2132–2152 1.00 7.14 0.00 100.0 MIR200CHG-202 lncRNA diencephalon (Tissue)
ENST00000732834.1 ENST00000732834.1_1719_1741_+ 1719–1741 1.00 7.14 0.00 100.0 MIR200CHG-202 lncRNA diencephalon (Tissue)
ENST00000738116.1 ENST00000738116.1_64_138_+ 64–138 769.00 11.30 1.59 100.0 SNHG16-266 lncRNA diencephalon (Tissue)
ENST00000738116.1 ENST00000738116.1_111_138_+ 111–138 1450.00 21.31 3.01 100.0 SNHG16-266 lncRNA diencephalon (Tissue)
ENST00000738116.1 ENST00000738116.1_64_97_+ 64–97 882.00 12.96 1.83 100.0 SNHG16-266 lncRNA diencephalon (Tissue)
ENST00000738116.1 ENST00000738116.1_88_138_+ 88–138 287.00 4.22 0.60 100.0 SNHG16-266 lncRNA diencephalon (Tissue)
ENST00000741826.1 ENST00000741826.1_184_205_+ 184–205 1314.00 52.14 2.72 100.0 MEG8-261 lncRNA diencephalon (Tissue)
ENST00000743202.1 ENST00000743202.1_560_577_+ 560–577 1660.00 71.68 3.44 100.0 NR2F2-AS1-327 lncRNA diencephalon (Tissue)
ENST00000747675.1 ENST00000747675.1_802_853_+ 802–853 48.00 2.69 0.10 36.09 ENST00000747675 lncRNA diencephalon (Tissue)
ENST00000747675.1 ENST00000747675.1_817_853_+ 817–853 321.00 17.97 0.67 100.0 ENST00000747675 lncRNA diencephalon (Tissue)
ENST00000747675.1 ENST00000747675.1_800_853_+ 800–853 39.00 2.18 0.08 44.83 ENST00000747675 lncRNA diencephalon (Tissue)
ENST00000747675.1 ENST00000747675.1_804_853_+ 804–853 46.00 2.58 0.10 48.94 ENST00000747675 lncRNA diencephalon (Tissue)
ENST00000747675.1 ENST00000747675.1_812_853_+ 812–853 219.00 12.26 0.45 100.0 ENST00000747675 lncRNA diencephalon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_188_+ 161–188 1020.00 65.13 2.11 96.14 SNHG26-250 lncRNA diencephalon (Tissue)
ENST00000748458.1 ENST00000748458.1_161_230_+ 161–230 252.00 16.09 0.52 90.65 SNHG26-250 lncRNA diencephalon (Tissue)
ENST00000752259.1 ENST00000752259.1_405_425_+ 405–425 14.00 0.75 0.03 100.0 LINC02422-207 lncRNA diencephalon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_523_+ 508–523 21.00 0.96 0.04 100.0 ENST00000753088 lncRNA diencephalon (Tissue)
ENST00000753088.1 ENST00000753088.1_508_542_+ 508–542 162.00 7.44 0.34 100.0 ENST00000753088 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_127_+ 98–127 542.42 3.75 1.12 34.97 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_133_172_+ 133–172 299.00 2.07 0.62 100.0 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_117_172_+ 117–172 591.00 4.08 1.23 100.0 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_137_172_+ 137–172 87.00 0.60 0.18 100.0 ENST00000756336 lncRNA diencephalon (Tissue)
ENST00000756336.1 ENST00000756336.1_98_132_+ 98–132 2327.84 16.08 4.83 36.18 ENST00000756336 lncRNA diencephalon (Tissue)