ENCFF001RMS

Library Details

Organism: Homo Sapiens
Biosample: diencephalon (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFR
Description: Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000617785.1 ENST00000617785.1_1_90_+ 1–90 9815.42 2.71 20.35 44.51 U2.3-201 snRNA diencephalon (Tissue)
ENST00000617785.1 ENST00000617785.1_1_92_+ 1–92 4962.01 1.37 10.29 39.49 U2.3-201 snRNA diencephalon (Tissue)
ENST00000619225.1 ENST00000619225.1_155_188_+ 155–188 4209.00 1.15 8.73 100.0 U2.6-201 snRNA diencephalon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_516_+ 499–516 1192.00 1.75 2.47 64.09 ENST00000619323 lncRNA diencephalon (Tissue)
ENST00000619323.3 ENST00000619323.3_499_520_+ 499–520 65129.00 95.71 135.05 98.57 ENST00000619323 lncRNA diencephalon (Tissue)
ENST00000625402.1 ENST00000625402.1_2_49_+ 2–49 287.00 21.81 0.60 100.0 SCARNA4-202 scaRNA diencephalon (Tissue)
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 5448.00 74.95 11.30 100.0 ENST00000625572 miRNA diencephalon (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 25578.00 95.43 53.04 100.0 ENST00000628177 snoRNA diencephalon (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 2536.00 93.13 5.26 100.0 ENST00000630615 snoRNA diencephalon (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 37.00 38.54 0.08 100.0 DMRT2-209 protein coding diencephalon (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 25.00 26.04 0.05 100.0 DMRT2-209 protein coding diencephalon (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 894.00 15.06 1.85 100.0 SNORD98-201 snoRNA diencephalon (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 3973.00 66.91 8.24 100.0 SNORD98-201 snoRNA diencephalon (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 100637.65 43.02 208.67 45.14 MIR106AHG-201 lncRNA diencephalon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 366.11 0.16 0.76 20.64 MIR106AHG-201 lncRNA diencephalon (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 272.00 0.12 0.56 100.0 MIR106AHG-201 lncRNA diencephalon (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 1351.26 0.58 2.80 76.17 MIR106AHG-201 lncRNA diencephalon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 18476.00 61.29 38.31 100.0 MEG8-222 lncRNA diencephalon (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 5139.00 17.05 10.66 100.0 MEG8-222 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 51605.00 7.05 107.00 96.19 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 254587.00 34.77 527.89 94.1 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 64080.00 8.75 132.87 100.0 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 38914.00 5.32 80.69 93.14 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 2298.00 0.31 4.76 100.0 SNHG14-224 lncRNA diencephalon (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 14308.00 1.95 29.67 47.55 SNHG14-224 lncRNA diencephalon (Tissue)