ENCFF001RMS
Library Details
| Organism: | Homo Sapiens |
|---|---|
| Biosample: | diencephalon (Tissue) |
| GEO DB ID: | Not available |
| ENCODE Experiment ID: | ENCSR000AFR |
| Description: | Part of ENCODE experiment ENCSR000AFR. The libraries contained in this experiment come from human fetal diencephalon tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size |
|---|---|
| Author: | Thomas Gingeras, CSHL |
sncRNAs in this Library
| Precursor Transcript ID | sncRNA Name | sncRNA position in precursor | Expression | Expression Fraction | Expression (CPM) | Prominence | Transcript Name | Transcript Type | Biosample |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000387365.1 | ENST00000387365.1_1_58_+ | 1–58 | 3289.00 | 30.41 | 6.82 | 100.0 | MT-TI-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_55_+ | 1–55 | 17.00 | 0.10 | 0.04 | 100.0 | MT-TQ-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_36_+ | 1–36 | 3878.00 | 22.85 | 8.04 | 78.25 | MT-TQ-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_32_+ | 1–32 | 4034.36 | 23.77 | 8.37 | 65.4 | MT-TQ-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387372.1 | ENST00000387372.1_1_30_+ | 1–30 | 1697.17 | 10.00 | 3.52 | 65.23 | MT-TQ-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387377.1 | ENST00000387377.1_1_31_+ | 1–31 | 2237.00 | 17.76 | 4.64 | 81.26 | MT-TM-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387377.1 | ENST00000387377.1_1_51_+ | 1–51 | 2246.00 | 17.84 | 4.66 | 100.0 | MT-TM-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387405.1 | ENST00000387405.1_1_24_+ | 1–24 | 559.00 | 15.24 | 1.16 | 100.0 | MT-TC-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_56_+ | 1–56 | 182.00 | 0.55 | 0.38 | 100.0 | MT-TY-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_37_+ | 1–37 | 11966.00 | 36.31 | 24.81 | 86.89 | MT-TY-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_32_+ | 1–32 | 1431.00 | 4.34 | 2.97 | 12.06 | MT-TY-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_50_+ | 1–50 | 28.00 | 0.08 | 0.06 | 100.0 | MT-TY-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_28_+ | 1–28 | 453.00 | 1.37 | 0.94 | 100.0 | MT-TY-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387409.1 | ENST00000387409.1_1_65_+ | 1–65 | 3844.00 | 11.67 | 7.97 | 100.0 | MT-TY-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387419.1 | ENST00000387419.1_1_51_+ | 1–51 | 14.00 | 3.20 | 0.03 | 100.0 | MT-TD-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_31_+ | 1–31 | 31.00 | 0.14 | 0.06 | 100.0 | MT-TK-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_58_+ | 1–58 | 6317.00 | 28.28 | 13.10 | 100.0 | MT-TK-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_52_+ | 1–52 | 4921.00 | 22.03 | 10.20 | 100.0 | MT-TK-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387421.1 | ENST00000387421.1_1_28_+ | 1–28 | 284.00 | 1.27 | 0.59 | 100.0 | MT-TK-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_26_+ | 1–26 | 1611.00 | 4.47 | 3.34 | 100.0 | MT-TS2-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_53_+ | 1–53 | 434.00 | 1.20 | 0.90 | 100.0 | MT-TS2-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387449.1 | ENST00000387449.1_1_20_+ | 1–20 | 1474.00 | 4.09 | 3.06 | 73.08 | MT-TS2-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387456.1 | ENST00000387456.1_1_31_+ | 1–31 | 1104.00 | 14.20 | 2.29 | 100.0 | MT-TL2-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_40_67_+ | 40–67 | 1941.00 | 0.68 | 4.02 | 62.47 | MT-TE-201 | Mt tRNA | diencephalon (Tissue) |
| ENST00000387459.1 | ENST00000387459.1_39_69_+ | 39–69 | 1166.00 | 0.41 | 2.42 | 43.8 | MT-TE-201 | Mt tRNA | diencephalon (Tissue) |