ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000654356.2 ENST00000654356.2_1000_1070_+ 1000–1070 370438.00 84.43 591.16 100.0 SNHG29-232 lncRNA frontal cortex (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1394_+ 1368–1394 143.00 0.03 0.23 100.0 SNHG29-232 lncRNA frontal cortex (Tissue)
ENST00000654356.2 ENST00000654356.2_1402_1442_+ 1402–1442 627.00 0.14 1.00 100.0 SNHG29-232 lncRNA frontal cortex (Tissue)
ENST00000654356.2 ENST00000654356.2_1393_1442_+ 1393–1442 3271.00 0.75 5.22 100.0 SNHG29-232 lncRNA frontal cortex (Tissue)
ENST00000654356.2 ENST00000654356.2_469_540_+ 469–540 16204.00 3.69 25.86 100.0 SNHG29-232 lncRNA frontal cortex (Tissue)
ENST00000654356.2 ENST00000654356.2_1368_1442_+ 1368–1442 40621.00 9.26 64.82 100.0 SNHG29-232 lncRNA frontal cortex (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3153_+ 3091–3153 1258.00 0.26 2.01 100.0 SNHG14-234 lncRNA frontal cortex (Tissue)
ENST00000655143.1 ENST00000655143.1_1868_1961_+ 1868–1961 211208.00 43.64 337.05 96.44 SNHG14-234 lncRNA frontal cortex (Tissue)
ENST00000655143.1 ENST00000655143.1_80_95_+ 80–95 1559.00 0.32 2.49 100.0 SNHG14-234 lncRNA frontal cortex (Tissue)
ENST00000655143.1 ENST00000655143.1_682_775_+ 682–775 33144.00 6.85 52.89 100.0 SNHG14-234 lncRNA frontal cortex (Tissue)
ENST00000655143.1 ENST00000655143.1_3091_3184_+ 3091–3184 73085.00 15.10 116.63 100.0 SNHG14-234 lncRNA frontal cortex (Tissue)
ENST00000655143.1 ENST00000655143.1_2_94_+ 2–94 64342.00 13.30 102.68 96.43 SNHG14-234 lncRNA frontal cortex (Tissue)
ENST00000655317.2 ENST00000655317.2_281_353_+ 281–353 1864.00 5.53 2.97 69.87 ENST00000655317 lncRNA frontal cortex (Tissue)
ENST00000655317.2 ENST00000655317.2_293_352_+ 293–352 6931.00 20.55 11.06 100.0 ENST00000655317 lncRNA frontal cortex (Tissue)
ENST00000655317.2 ENST00000655317.2_283_352_+ 283–352 1722.00 5.11 2.75 36.57 ENST00000655317 lncRNA frontal cortex (Tissue)
ENST00000655317.2 ENST00000655317.2_271_353_+ 271–353 2380.00 7.06 3.80 100.0 ENST00000655317 lncRNA frontal cortex (Tissue)
ENST00000655600.1 ENST00000655600.1_807_842_+ 807–842 1348.00 8.73 2.15 88.98 LINC01962-202 lncRNA frontal cortex (Tissue)
ENST00000655600.1 ENST00000655600.1_807_839_+ 807–839 11125.00 72.03 17.75 100.0 LINC01962-202 lncRNA frontal cortex (Tissue)
ENST00000655600.1 ENST00000655600.1_807_829_+ 807–829 274.00 1.77 0.44 100.0 LINC01962-202 lncRNA frontal cortex (Tissue)
ENST00000655965.1 ENST00000655965.1_2745_2837_+ 2745–2837 83708.00 31.85 133.58 95.11 SNHG14-241 lncRNA frontal cortex (Tissue)
ENST00000656987.1 ENST00000656987.1_14_79_+ 14–79 51914.00 96.93 82.85 100.0 MEG8-228 lncRNA frontal cortex (Tissue)
ENST00000657237.1 ENST00000657237.1_1408_1496_+ 1408–1496 12453.00 25.26 19.87 100.0 SNHG14-254 lncRNA frontal cortex (Tissue)
ENST00000658769.1 ENST00000658769.1_2_96_+ 2–96 17577.00 20.00 28.05 100.0 SNHG14-261 lncRNA frontal cortex (Tissue)
ENST00000658769.1 ENST00000658769.1_810_903_+ 810–903 39120.00 44.51 62.43 90.02 SNHG14-261 lncRNA frontal cortex (Tissue)
ENST00000658801.2 ENST00000658801.2_139_171_+ 139–171 14.00 0.34 0.02 100.0 LIMD1-AS1-204 lncRNA frontal cortex (Tissue)