ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 542.00 0.03 0.86 100.0 GAS5-230 retained intron frontal cortex (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1643.00 14.75 2.62 100.0 FTX-219 lncRNA frontal cortex (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 3709.00 33.30 5.92 80.61 FTX-219 lncRNA frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 113.00 4.54 0.18 47.28 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 11.00 0.44 0.02 9.02 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 172.00 6.92 0.27 57.33 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 126.00 5.07 0.20 52.72 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 444.00 17.85 0.71 90.24 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 38.00 1.53 0.06 100.0 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 52.00 2.09 0.08 100.0 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 599.00 24.09 0.96 100.0 CTC1-214 protein coding frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 247.00 0.77 0.39 61.75 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 1318.00 4.09 2.10 99.32 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 762.00 2.37 1.22 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 1577.00 4.90 2.52 61.12 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 449.00 1.39 0.72 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 437.00 1.36 0.70 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 339.00 1.05 0.54 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 546.00 1.70 0.87 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 418.00 1.30 0.67 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_36_+ 6–36 4183.00 12.99 6.68 47.04 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_51_+ 6–51 1384.00 4.30 2.21 100.0 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000651540.1 ENST00000651540.1_6_39_+ 6–39 12768.00 39.66 20.38 88.06 ENST00000651540 lncRNA frontal cortex (Tissue)
ENST00000652769.2 ENST00000652769.2_3101_3122_+ 3101–3122 18222.00 1.15 29.08 100.0 MIRLET7A1HG-203 lncRNA frontal cortex (Tissue)
ENST00000653102.1 ENST00000653102.1_9_77_+ 9–77 11500.00 93.59 18.35 100.0 MEG8-225 lncRNA frontal cortex (Tissue)