ENCFF001RMP

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000485101.5 ENST00000485101.5_343_393_+ 343–393 2233.00 0.26 3.56 50.89 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_418_+ 343–418 2706.00 0.32 4.32 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_365_405_+ 365–405 31452.00 3.68 50.19 86.25 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_400_+ 343–400 3056.00 0.36 4.88 92.3 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_362_405_+ 362–405 5314.00 0.62 8.48 65.34 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_360_408_+ 360–408 162.00 0.02 0.26 60.45 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_390_+ 343–390 4320.00 0.51 6.89 83.54 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_408_+ 343–408 62593.00 7.32 99.89 60.44 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_413_+ 343–413 370.00 0.04 0.59 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_405_+ 343–405 713515.00 83.43 1138.66 98.94 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_365_408_+ 365–408 1720.00 0.20 2.74 40.67 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_434_+ 343–434 4.00 0.00 0.01 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_343_376_+ 343–376 299.00 0.03 0.48 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485101.5 ENST00000485101.5_2108_2152_+ 2108–2152 43.00 0.01 0.07 100.0 EIF4A2-219 retained intron frontal cortex (Tissue)
ENST00000485390.5 ENST00000485390.5_230_303_+ 230–303 28907.00 95.74 46.13 100.0 RPS8-207 protein coding CDS not defined frontal cortex (Tissue)
ENST00000485706.5 ENST00000485706.5_456_485_+ 456–485 191.00 8.49 0.30 100.0 RPL7A-206 protein coding CDS not defined frontal cortex (Tissue)
ENST00000485706.5 ENST00000485706.5_486_524_+ 486–524 813.00 36.15 1.30 100.0 RPL7A-206 protein coding CDS not defined frontal cortex (Tissue)
ENST00000485706.5 ENST00000485706.5_456_524_+ 456–524 342.00 15.21 0.55 100.0 RPL7A-206 protein coding CDS not defined frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_123_189_+ 123–189 2091941.00 94.02 3338.41 99.67 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_138_189_+ 138–189 1537.00 0.07 2.45 100.0 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_122_192_+ 122–192 113213.00 5.09 180.67 97.96 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_173_189_+ 173–189 3957.00 0.18 6.31 100.0 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000485756.1 ENST00000485756.1_123_168_+ 123–168 5157.00 0.23 8.23 100.0 RPL21-209 retained intron frontal cortex (Tissue)
ENST00000486255.1 ENST00000486255.1_1073_1096_+ 1073–1096 49.00 33.11 0.08 100.0 GABRE-209 retained intron frontal cortex (Tissue)
ENST00000488946.1 ENST00000488946.1_844_886_+ 844–886 9.00 0.00 0.01 100.0 RPL13A-212 retained intron frontal cortex (Tissue)