ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 36704.00 2.71 70.87 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 41136.00 3.03 79.42 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 56036.00 4.13 108.19 96.27 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 210773.00 15.55 406.94 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 431.00 0.03 0.83 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 4886.00 0.36 9.43 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 39399.00 2.91 76.07 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 314.00 0.02 0.61 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1397.00 14.17 2.70 100.0 FTX-219 lncRNA cerebellum (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 3760.00 38.14 7.26 82.98 FTX-219 lncRNA cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 244.00 1.79 0.47 40.07 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 2000.00 14.71 3.86 85.25 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 1131.00 8.32 2.18 29.1 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 365.00 2.69 0.70 59.93 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 4302.00 31.65 8.31 92.8 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 741.00 5.45 1.43 100.0 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 389.00 2.86 0.75 100.0 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 761.00 5.60 1.47 100.0 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 3260.00 2.10 6.29 66.94 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 5400.00 3.48 10.43 98.58 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 1661.00 1.07 3.21 100.0 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 9729.00 6.26 18.78 58.49 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 747.00 0.48 1.44 100.0 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 654.00 0.42 1.26 100.0 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 686.00 0.44 1.32 100.0 ENST00000651540 lncRNA cerebellum (Tissue)