ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 393.00 0.10 0.76 100.0 SNHG14-224 lncRNA cerebellum (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 6157.00 1.53 11.89 52.45 SNHG14-224 lncRNA cerebellum (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 32903.00 8.20 63.53 78.06 SNHG14-224 lncRNA cerebellum (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 18115.00 4.52 34.97 55.25 SNHG14-224 lncRNA cerebellum (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1481.62 41.28 2.86 82.86 5S_rRNA.20-201 rRNA pseudogene cerebellum (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 456.00 4.38 0.88 100.0 HSPA9-211 retained intron cerebellum (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 5324.00 51.11 10.28 74.84 HSPA9-211 retained intron cerebellum (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 14312.00 81.16 27.63 100.0 DNM3OS-205 lncRNA cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 873.00 0.06 1.69 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 421.00 0.03 0.81 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 1351.00 0.10 2.61 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 1130.00 0.08 2.18 73.95 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 6321.00 0.47 12.20 96.15 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 487.00 0.04 0.94 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 199.00 0.01 0.38 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1762.00 0.13 3.40 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 892958.00 65.86 1724.05 99.78 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 1603.00 0.12 3.09 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 6103.00 0.45 11.78 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 2037.00 0.15 3.93 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 1717.00 0.13 3.32 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 258.00 0.02 0.50 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 284.00 0.02 0.55 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 977.00 0.07 1.89 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 10894.00 0.80 21.03 83.83 GAS5-230 retained intron cerebellum (Tissue)