ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 5108.00 61.31 9.86 100.0 RPL4-214 retained intron cerebellum (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 6820.31 24.37 13.17 45.56 POLG-DT-202 lncRNA cerebellum (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 9049.90 32.34 17.47 61.18 POLG-DT-202 lncRNA cerebellum (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 366.00 1.31 0.71 100.0 POLG-DT-202 lncRNA cerebellum (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 2765.00 36.81 5.34 100.0 ENST00000570843 lncRNA cerebellum (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 22122.00 61.93 42.71 100.0 MIR497HG-207 lncRNA cerebellum (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 201817.00 99.16 389.65 99.54 MIR22HG-212 lncRNA cerebellum (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 108332.00 91.63 209.16 94.32 SNORD53B-201 snoRNA cerebellum (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 1164.00 0.98 2.25 76.53 SNORD53B-201 snoRNA cerebellum (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 357.00 0.30 0.69 23.47 SNORD53B-201 snoRNA cerebellum (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 290.00 85.29 0.56 100.0 ENST00000578036 lncRNA cerebellum (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 8213.00 90.72 15.86 100.0 RPL23A-207 protein coding cerebellum (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 3402.00 91.35 6.57 100.0 MIR744-201 miRNA cerebellum (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 360.00 65.93 0.70 100.0 MIR378C-201 miRNA cerebellum (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 4756.00 53.87 9.18 77.64 MIR142HG-201 lncRNA cerebellum (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 64.00 0.72 0.12 100.0 MIR142HG-201 lncRNA cerebellum (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 2044.00 23.15 3.95 50.37 MIR142HG-201 lncRNA cerebellum (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 827.00 6.67 1.60 100.0 SNORD3C-201 snoRNA cerebellum (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 128.86 0.05 0.25 68.18 RPL23A-208 retained intron cerebellum (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 42.71 0.01 0.08 40.68 RPL23A-208 retained intron cerebellum (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 216280.00 75.77 417.58 87.59 RPL23A-208 retained intron cerebellum (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 66458.00 23.28 128.31 91.35 RPL23A-208 retained intron cerebellum (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 3.00 0.47 0.01 100.0 MIR133A1HG-202 lncRNA cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 200.00 0.07 0.39 100.0 RPL17-211 retained intron cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 8714.00 3.08 16.82 37.71 RPL17-211 retained intron cerebellum (Tissue)