ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000533872.5 ENST00000533872.5_427_507_+ 427–507 543.00 28.96 1.05 100.0 RPS2-215 retained intron cerebellum (Tissue)
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 5777.00 83.48 11.15 84.43 ENST00000548801 lncRNA cerebellum (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 41.00 0.40 0.08 100.0 ENST00000554988 lncRNA cerebellum (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 1717.00 16.64 3.32 100.0 ENST00000554988 lncRNA cerebellum (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 2451.00 23.75 4.73 100.0 ENST00000554988 lncRNA cerebellum (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 759.00 0.65 1.47 100.0 SNHG14-220 retained intron cerebellum (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 924.00 0.79 1.78 100.0 SNHG14-220 retained intron cerebellum (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 33792.00 28.86 65.24 100.0 SNHG14-220 retained intron cerebellum (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 75993.00 64.90 146.72 100.0 SNHG14-220 retained intron cerebellum (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 3319.00 97.99 6.41 100.0 TEKT4P2-201 transcribed unprocessed pseudogene cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 228753.00 95.94 441.66 99.16 RPL4-202 retained intron cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 196.00 0.08 0.38 100.0 RPL4-202 retained intron cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 25.00 0.01 0.05 100.0 RPL4-202 retained intron cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 670.00 0.28 1.29 100.0 RPL4-202 retained intron cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 439.00 0.18 0.85 100.0 RPL4-202 retained intron cerebellum (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 3.00 0.01 0.01 100.0 ENST00000563103 lncRNA cerebellum (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 342.00 1.13 0.66 100.0 RPL4-207 retained intron cerebellum (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 23562.00 77.67 45.49 100.0 RPL4-207 retained intron cerebellum (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 1837.00 11.08 3.55 82.27 ENST00000565336 lncRNA cerebellum (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 11706.00 70.63 22.60 92.87 ENST00000565336 lncRNA cerebellum (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 444903.00 81.70 858.98 85.1 RBMX-210 retained intron cerebellum (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 2995.00 0.55 5.78 100.0 RBMX-210 retained intron cerebellum (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 779.00 0.14 1.50 100.0 RBMX-210 retained intron cerebellum (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 4710.00 0.86 9.09 100.0 RBMX-210 retained intron cerebellum (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 643.00 7.72 1.24 100.0 RPL4-214 retained intron cerebellum (Tissue)