ENCFF001RMO

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 30894.00 10.93 59.65 46.04 RPL17-211 retained intron cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 138949.00 49.14 268.27 95.02 RPL17-211 retained intron cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 96463.00 34.12 186.24 97.54 RPL17-211 retained intron cerebellum (Tissue)
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 9986.00 46.28 19.28 68.14 ENST00000582320 lncRNA cerebellum (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 2978.00 13.80 5.75 100.0 ENST00000582320 lncRNA cerebellum (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 1858.00 8.61 3.59 100.0 ENST00000582320 lncRNA cerebellum (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 2680.00 6.80 5.17 100.0 RPL17-214 retained intron cerebellum (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 11858.35 30.10 22.90 43.05 RPL17-214 retained intron cerebellum (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 19858.00 50.41 38.34 59.38 RPL17-214 retained intron cerebellum (Tissue)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 1781.00 0.13 3.44 100.0 SNORD43-201 snoRNA cerebellum (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 1368270.00 98.98 2641.74 99.92 SNORD43-201 snoRNA cerebellum (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 1076.00 0.08 2.08 100.0 SNORD43-201 snoRNA cerebellum (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 1259.00 47.51 2.43 100.0 MIR151B-201 miRNA cerebellum (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 448.00 3.14 0.86 100.0 SNORD3A-201 snoRNA cerebellum (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 26422.00 90.58 51.01 100.0 SNORD92-201 snoRNA cerebellum (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 18779.00 65.37 36.26 100.0 NSRP1-214 protein coding cerebellum (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 6548.00 22.79 12.64 85.52 NSRP1-214 protein coding cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 116.00 1.39 0.22 100.0 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 1801.00 21.61 3.48 92.88 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 3068.00 36.80 5.92 85.41 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 1029.00 12.34 1.99 85.54 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 633.00 7.59 1.22 74.21 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 23.00 18.85 0.04 100.0 ODAD3-204 nonsense mediated decay cerebellum (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 500.00 1.40 0.97 100.0 VMP1-217 retained intron cerebellum (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 135.00 0.38 0.26 100.0 VMP1-217 retained intron cerebellum (Tissue)