ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000677786.1 ENST00000677786.1_3513_3605_+ 3513–3605 1.00 0.10 0.00 100.0 NCL-216 retained intron uterus (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 384.00 17.99 0.73 100.0 FMN2-209 protein coding CDS not defined uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 21.00 0.33 0.04 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 25.00 0.39 0.05 16.78 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 1684.00 26.46 3.22 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1440_+ 1409–1440 1067.00 16.77 2.04 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1405_1444_+ 1405–1444 35.00 0.55 0.07 100.0 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1421_+ 1409–1421 124.00 1.95 0.24 83.22 LINC02739-203 lncRNA uterus (Tissue)
ENST00000685227.3 ENST00000685227.3_1036_1055_+ 1036–1055 22.00 78.57 0.04 100.0 MIR124-1HG-216 lncRNA uterus (Tissue)
ENST00000685307.3 ENST00000685307.3_1198_1226_+ 1198–1226 245.00 11.51 0.47 100.0 SNHG10-212 lncRNA uterus (Tissue)
ENST00000686899.3 ENST00000686899.3_568_649_+ 568–649 73448.64 42.75 140.25 45.48 SNHG19-202 lncRNA uterus (Tissue)
ENST00000686899.3 ENST00000686899.3_568_647_+ 568–647 88072.16 51.26 168.17 63.96 SNHG19-202 lncRNA uterus (Tissue)
ENST00000686899.3 ENST00000686899.3_562_648_+ 562–648 25.17 0.01 0.05 86.81 SNHG19-202 lncRNA uterus (Tissue)
ENST00000686899.3 ENST00000686899.3_562_650_+ 562–650 2.16 0.00 0.00 54.04 SNHG19-202 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_548_571_+ 548–571 11733.00 21.99 22.40 100.0 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_1402_1424_+ 1402–1424 27010.00 50.61 51.58 78.17 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000688264.3 ENST00000688264.3_1362_1387_+ 1362–1387 350.00 0.66 0.67 100.0 MIR222HG-206 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_190_210_+ 190–210 0.76 10.86 0.00 76.0 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_493_514_+ 493–514 1.00 14.29 0.00 100.0 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000688371.3 ENST00000688371.3_458_478_+ 458–478 2.00 28.57 0.00 100.0 MIR302CHG-205 lncRNA uterus (Tissue)
ENST00000693179.2 ENST00000693179.2_532_619_+ 532–619 1.00 0.13 0.00 100.0 SNHG8-214 lncRNA uterus (Tissue)
ENST00000697734.1 ENST00000697734.1_1838_1871_+ 1838–1871 271.00 26.41 0.52 100.0 RPSA-216 retained intron uterus (Tissue)
ENST00000697879.1 ENST00000697879.1_547_564_+ 547–564 5016.00 1.60 9.58 67.3 MIR99AHG-370 lncRNA uterus (Tissue)
ENST00000697879.1 ENST00000697879.1_547_568_+ 547–568 296546.00 94.87 566.25 98.52 MIR99AHG-370 lncRNA uterus (Tissue)
ENST00000699245.1 ENST00000699245.1_739_776_+ 739–776 175.00 86.21 0.33 100.0 HPS4-237 retained intron uterus (Tissue)