ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 7.00 12.07 0.01 100.0 HCN2-201 protein coding uterus (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 702.00 76.97 1.34 100.0 SLC49A4-201 protein coding uterus (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 316.00 17.35 0.60 100.0 ATP5MC3-201 protein coding uterus (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 265.00 93.97 0.51 100.0 CDC25A-201 protein coding uterus (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 53.00 45.30 0.10 100.0 BLOC1S4-201 protein coding uterus (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 575.00 13.29 1.10 100.0 ATAD5-201 protein coding uterus (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 933.00 44.94 1.78 100.0 SLITRK5-201 protein coding uterus (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 52.00 46.85 0.10 100.0 HASPIN-201 protein coding uterus (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 409.00 69.80 0.78 100.0 PRR14L-201 protein coding uterus (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 12311.00 99.03 23.51 100.0 ATG101-201 protein coding uterus (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 6687.00 92.63 12.77 100.0 PRICKLE1-201 protein coding uterus (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 6340.00 96.99 12.11 99.69 MIR133A2-201 miRNA uterus (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 16.00 15.24 0.03 100.0 PBLD-204 protein coding uterus (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 679848.00 85.53 1298.17 98.76 MIRLET7BHG-201 lncRNA uterus (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 75616.00 9.51 144.39 90.17 MIRLET7BHG-201 lncRNA uterus (Tissue)
ENST00000362103.4 ENST00000362103.4_40_58_+ 40–58 29.00 2.61 0.06 39.73 MIR375-201 miRNA uterus (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 1065.00 95.77 2.03 98.16 MIR375-201 miRNA uterus (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 5555.00 73.71 10.61 100.0 MIR30E-201 miRNA uterus (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 1143.00 15.17 2.18 100.0 MIR30E-201 miRNA uterus (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 159.00 44.17 0.30 100.0 MIR29A-201 miRNA uterus (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 566.00 76.28 1.08 100.0 MIR345-201 miRNA uterus (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 109700.00 97.47 209.47 100.0 MIR16-2-201 miRNA uterus (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 187.00 4.67 0.36 100.0 MIR340-201 miRNA uterus (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 3527.00 88.17 6.73 100.0 MIR340-201 miRNA uterus (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 6803.00 77.56 12.99 100.0 MIR107-201 miRNA uterus (Tissue)