ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 46651.00 1.94 89.08 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 83588.00 3.48 159.61 97.1 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 342010.00 14.24 653.07 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 480.00 0.02 0.92 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 9921.00 0.41 18.94 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 22766.00 0.95 43.47 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 1.00 0.00 0.00 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 416.00 0.02 0.79 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1135.00 27.64 2.17 100.0 FTX-219 lncRNA uterus (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 995.00 24.23 1.90 79.73 FTX-219 lncRNA uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 108.00 1.97 0.21 47.58 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 73.00 1.33 0.14 52.52 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 1390.00 25.41 2.65 63.44 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 119.00 2.18 0.23 52.42 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 1381.00 25.24 2.64 86.47 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 346.00 6.32 0.66 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 505.00 9.23 0.96 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 204.00 3.73 0.39 100.0 CTC1-214 protein coding uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 18643.00 5.06 35.60 71.19 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 10621.00 2.88 20.28 97.65 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 8767.00 2.38 16.74 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 18977.00 5.15 36.24 50.4 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 5533.00 1.50 10.57 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 7937.00 2.15 15.16 100.0 ENST00000651540 lncRNA uterus (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 1978.00 0.54 3.78 100.0 ENST00000651540 lncRNA uterus (Tissue)