ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 3372.00 2.81 6.44 52.61 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 4395.00 3.67 8.39 73.63 SNHG14-224 lncRNA uterus (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 3445.00 2.88 6.58 61.78 SNHG14-224 lncRNA uterus (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 3824.38 22.89 7.30 70.7 5S_rRNA.20-201 rRNA pseudogene uterus (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 530.00 7.70 1.01 100.0 HSPA9-211 retained intron uterus (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 481.00 6.99 0.92 20.4 HSPA9-211 retained intron uterus (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 142348.00 88.59 271.81 100.0 DNM3OS-205 lncRNA uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 158.00 0.01 0.30 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 5002.00 0.21 9.55 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 3921.00 0.16 7.49 74.23 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 23257.00 0.97 44.41 92.83 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 39.00 0.00 0.07 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 947.00 0.04 1.81 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1085.00 0.05 2.07 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1738865.00 72.39 3320.35 99.81 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2315.00 0.10 4.42 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 3709.00 0.15 7.08 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 1597.00 0.07 3.05 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 2386.00 0.10 4.56 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 3554.00 0.15 6.79 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 1299.00 0.05 2.48 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 619.00 0.03 1.18 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 722.00 0.03 1.38 100.0 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 16071.00 0.67 30.69 84.76 GAS5-230 retained intron uterus (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 5278.00 0.22 10.08 100.0 GAS5-230 retained intron uterus (Tissue)