ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 13387.48 38.71 25.56 52.11 POLG-DT-202 lncRNA uterus (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 12095.37 34.97 23.10 47.44 POLG-DT-202 lncRNA uterus (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 550.00 1.59 1.05 100.0 POLG-DT-202 lncRNA uterus (Tissue)
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 10362.00 79.21 19.79 100.0 ENST00000570843 lncRNA uterus (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 2950.00 83.29 5.63 100.0 MIR497HG-207 lncRNA uterus (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 173291.00 99.31 330.90 99.58 MIR22HG-212 lncRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 194.00 0.11 0.37 21.8 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 160682.00 94.38 306.82 96.97 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 696.00 0.41 1.33 78.2 SNORD53B-201 snoRNA uterus (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 4181.00 96.65 7.98 100.0 ENST00000578036 lncRNA uterus (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 5109.00 81.78 9.76 100.0 RPL23A-207 protein coding uterus (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 734.00 79.52 1.40 100.0 MIR744-201 miRNA uterus (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 78.00 63.41 0.15 100.0 MIR378C-201 miRNA uterus (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 3089.00 76.14 5.90 82.22 MIR142HG-201 lncRNA uterus (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 10.00 0.25 0.02 100.0 MIR142HG-201 lncRNA uterus (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 54.00 1.33 0.10 5.19 MIR142HG-201 lncRNA uterus (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 503.00 2.05 0.96 100.0 SNORD3C-201 snoRNA uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 1165.58 0.24 2.23 63.9 RPL23A-208 retained intron uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 642.14 0.13 1.23 47.25 RPL23A-208 retained intron uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 374216.00 77.91 714.56 89.64 RPL23A-208 retained intron uterus (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 94408.00 19.66 180.27 90.62 RPL23A-208 retained intron uterus (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 238.00 3.49 0.45 100.0 MIR133A1HG-202 lncRNA uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 10656.00 5.35 20.35 37.72 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 16404.00 8.23 31.32 52.62 RPL17-211 retained intron uterus (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 759.00 0.38 1.45 100.0 RPL17-211 retained intron uterus (Tissue)