ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000548801.1 ENST00000548801.1_2334_2355_+ 2334–2355 518844.00 87.42 990.73 88.67 ENST00000548801 lncRNA uterus (Tissue)
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 2390.00 11.64 4.56 100.0 ENST00000554988 lncRNA uterus (Tissue)
ENST00000554988.2 ENST00000554988.2_275_334_+ 275–334 4421.00 21.53 8.44 100.0 ENST00000554988 lncRNA uterus (Tissue)
ENST00000554988.2 ENST00000554988.2_275_320_+ 275–320 178.00 0.87 0.34 100.0 ENST00000554988 lncRNA uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 563.00 0.63 1.08 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 38897.00 43.47 74.27 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 44689.00 49.94 85.33 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 619.00 0.69 1.18 100.0 SNHG14-220 retained intron uterus (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 2999.00 99.83 5.73 100.0 TEKT4P2-201 transcribed unprocessed pseudogene uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 345.00 0.14 0.66 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 55.00 0.02 0.11 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 1729.00 0.69 3.30 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 1267.00 0.50 2.42 100.0 RPL4-202 retained intron uterus (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 229752.00 91.36 438.71 98.54 RPL4-202 retained intron uterus (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 2.00 0.01 0.00 100.0 ENST00000563103 lncRNA uterus (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 8869.00 67.01 16.94 100.0 RPL4-207 retained intron uterus (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 92.00 0.70 0.18 100.0 RPL4-207 retained intron uterus (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 5115.00 11.52 9.77 75.22 ENST00000565336 lncRNA uterus (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 32117.00 72.32 61.33 92.92 ENST00000565336 lncRNA uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 522913.00 82.50 998.50 86.17 RBMX-210 retained intron uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 2578.00 0.41 4.92 100.0 RBMX-210 retained intron uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 1138.00 0.18 2.17 100.0 RBMX-210 retained intron uterus (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 2517.00 0.40 4.81 100.0 RBMX-210 retained intron uterus (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 9596.00 60.48 18.32 100.0 RPL4-214 retained intron uterus (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 627.00 3.95 1.20 100.0 RPL4-214 retained intron uterus (Tissue)