ENCFF001RMN

Library Details

Organism: Homo Sapiens
Biosample: uterus (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AGH
Description: Part of ENCODE experiment ENCSR000AGH. The libraries contained in this experiment come from human fetal uterus tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000496055.5 ENST00000496055.5_505_553_+ 505–553 832.00 0.51 1.59 100.0 RABGGTB-213 protein coding CDS not defined uterus (Tissue)
ENST00000496254.5 ENST00000496254.5_747_811_+ 747–811 24631.00 74.15 47.03 100.0 GNL3-211 retained intron uterus (Tissue)
ENST00000496254.5 ENST00000496254.5_774_811_+ 774–811 3501.00 10.54 6.69 100.0 GNL3-211 retained intron uterus (Tissue)
ENST00000497519.1 ENST00000497519.1_681_769_+ 681–769 12675.00 71.20 24.20 100.0 RPL5-205 retained intron uterus (Tissue)
ENST00000497519.1 ENST00000497519.1_675_769_+ 675–769 2.00 0.01 0.00 66.67 RPL5-205 retained intron uterus (Tissue)
ENST00000497519.1 ENST00000497519.1_681_708_+ 681–708 668.00 3.75 1.28 100.0 RPL5-205 retained intron uterus (Tissue)
ENST00000499525.1 ENST00000499525.1_506_558_+ 506–558 105.00 9.15 0.20 100.0 ZBED9-AS1-201 lncRNA uterus (Tissue)
ENST00000507485.1 ENST00000507485.1_1149_1210_+ 1149–1210 29466.00 87.37 56.27 100.0 RPS3A-206 retained intron uterus (Tissue)
ENST00000509578.1 ENST00000509578.1_1330_1389_+ 1330–1389 13654.00 93.83 26.07 100.0 COX7C-203 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_263_305_+ 263–305 1346.00 0.38 2.57 100.0 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_241_306_+ 241–306 259908.57 74.01 496.29 79.96 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_272_305_+ 272–305 4959.00 1.41 9.47 87.12 RACK1-229 protein coding uterus (Tissue)
ENST00000513027.3 ENST00000513027.3_241_308_+ 241–308 62516.27 17.80 119.37 24.9 RACK1-229 protein coding uterus (Tissue)
ENST00000513060.5 ENST00000513060.5_712_783_+ 712–783 106877.00 87.85 204.08 98.75 RACK1-230 retained intron uterus (Tissue)
ENST00000513060.5 ENST00000513060.5_713_786_+ 713–786 12464.00 10.25 23.80 65.29 RACK1-230 retained intron uterus (Tissue)
ENST00000515961.1 ENST00000515961.1_38_58_+ 38–58 359.00 13.17 0.69 100.0 RNA5SP486-201 rRNA pseudogene uterus (Tissue)
ENST00000516201.1 ENST00000516201.1_1_30_+ 1–30 795.00 64.95 1.52 100.0 SCARNA5-201 scaRNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_48_93_+ 48–93 35957.00 21.78 68.66 98.79 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_17_+ 1–17 54.00 0.03 0.10 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_39_+ 1–39 1623.00 0.98 3.10 57.55 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_67_93_+ 67–93 6847.00 4.15 13.07 47.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_41_93_+ 41–93 1000.00 0.61 1.91 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_36_+ 1–36 4120.00 2.50 7.87 77.07 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_1_48_+ 1–48 939.00 0.57 1.79 100.0 RNY4-201 misc RNA uterus (Tissue)
ENST00000516507.1 ENST00000516507.1_54_93_+ 54–93 335.00 0.20 0.64 56.02 RNY4-201 misc RNA uterus (Tissue)