ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_34_+ 1–34 6442.00 64.59 10.62 90.38 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_41_+ 1–41 231.00 2.32 0.38 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3182635 tRNA-transcript-chr16-3182635_31_53_+ 31–53 94.00 3.91 0.15 100.0 TRNA-TRANSCRIPT-CHR16-3182635 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3191501 tRNA-transcript-chr16-3191501_1_33_+ 1–33 681.00 21.29 1.12 66.31 TRNA-TRANSCRIPT-CHR16-3191501 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3191989 tRNA-transcript-chr16-3191989_31_53_+ 31–53 19.00 0.95 0.03 100.0 TRNA-TRANSCRIPT-CHR16-3191989 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_52_+ 1–52 570.00 28.06 0.94 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_35_+ 1–35 82.00 4.04 0.14 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_1_32_+ 1–32 82.00 4.04 0.14 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-636736 tRNA-transcript-chr16-636736_33_71_+ 33–71 2.00 0.10 0.00 100.0 TRNA-TRANSCRIPT-CHR16-636736 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-70789507 tRNA-transcript-chr16-70789507_1_48_+ 1–48 199.00 0.20 0.33 100.0 TRNA-TRANSCRIPT-CHR16-70789507 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-19860862 tRNA-transcript-chr17-19860862_1_32_+ 1–32 50.00 22.83 0.08 100.0 TRNA-TRANSCRIPT-CHR17-19860862 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_34_+ 1–34 253.00 41.27 0.42 77.37 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_13_+ 1–13 14.00 2.28 0.02 100.0 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-39154491 tRNA-transcript-chr17-39154491_1_32_+ 1–32 74.00 12.07 0.12 22.63 TRNA-TRANSCRIPT-CHR17-39154491 Cys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_1_53_+ 1–53 2908.00 50.79 4.79 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-49192528 tRNA-transcript-chr17-49192528_32_53_+ 32–53 2.00 0.03 0.00 100.0 TRNA-TRANSCRIPT-CHR17-49192528 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-68019897 tRNA-transcript-chr17-68019897_1_33_+ 1–33 55.00 21.24 0.09 100.0 TRNA-TRANSCRIPT-CHR17-68019897 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-75033906 tRNA-transcript-chr17-75033906_12_29_+ 12–29 199.00 58.70 0.33 100.0 TRNA-TRANSCRIPT-CHR17-75033906 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-75035113 tRNA-transcript-chr17-75035113_1_33_+ 1–33 108.00 34.50 0.18 100.0 TRNA-TRANSCRIPT-CHR17-75035113 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_8_53_+ 8–53 74.00 0.19 0.12 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_21_72_+ 21–72 25.00 0.06 0.04 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_17_54_+ 17–54 29.00 0.07 0.05 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_34_+ 1–34 103.00 0.26 0.17 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_1_49_+ 1–49 295.00 0.74 0.49 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8119752 tRNA-transcript-chr17-8119752_34_53_+ 34–53 18.00 0.05 0.03 100.0 TRNA-TRANSCRIPT-CHR17-8119752 Gln tRNA frontal cortex (Tissue)