ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_1_52_+ 1–52 6854.00 7.00 11.30 97.28 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_13_32_+ 13–32 86.00 0.09 0.14 69.92 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8125746 tRNA-transcript-chr17-8125746_10_32_+ 10–32 31.00 0.03 0.05 62.0 TRNA-TRANSCRIPT-CHR17-8125746 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR17-8222238 tRNA-transcript-chr17-8222238_1_33_+ 1–33 366.00 13.21 0.60 38.77 TRNA-TRANSCRIPT-CHR17-8222238 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-7930279 tRNA-transcript-chr1-7930279_1_33_+ 1–33 177.00 87.19 0.29 100.0 TRNA-TRANSCRIPT-CHR1-7930279 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR19-45478602 tRNA-transcript-chr19-45478602_1_37_+ 1–37 111.00 26.12 0.18 93.28 TRNA-TRANSCRIPT-CHR19-45478602 SeC(e) tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR20-45322361 tRNA-transcript-chr20-45322361_1_33_+ 1–33 94.00 89.52 0.15 100.0 TRNA-TRANSCRIPT-CHR20-45322361 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_3_52_+ 3–52 157.00 2.35 0.26 75.12 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_52_+ 1–52 52.00 0.78 0.09 24.88 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR21-17454789 tRNA-transcript-chr21-17454789_1_32_+ 1–32 3013.00 45.01 4.97 80.37 TRNA-TRANSCRIPT-CHR21-17454789 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_35_+ 1–35 1907.26 19.69 3.14 35.86 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_28_+ 1–28 416.00 4.30 0.69 46.64 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR2-130337128 tRNA-transcript-chr2-130337128_1_33_+ 1–33 3861.81 39.88 6.36 71.08 TRNA-TRANSCRIPT-CHR2-130337128 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR2-203364408 tRNA-transcript-chr2-203364408_2_32_+ 2–32 5594.00 89.05 9.22 96.72 TRNA-TRANSCRIPT-CHR2-203364408 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR3-104160680 tRNA-transcript-chr3-104160680_12_33_+ 12–33 18.00 1.13 0.03 100.0 TRNA-TRANSCRIPT-CHR3-104160680 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR5-181188854 tRNA-transcript-chr5-181188854_1_32_+ 1–32 448.00 14.65 0.74 78.6 TRNA-TRANSCRIPT-CHR5-181188854 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR5-181218270 tRNA-transcript-chr5-181218270_1_39_+ 1–39 35.00 0.02 0.06 100.0 TRNA-TRANSCRIPT-CHR5-181218270 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-125780247 tRNA-transcript-chr6-125780247_1_42_+ 1–42 659.00 1.12 1.09 70.33 TRNA-TRANSCRIPT-CHR6-125780247 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-144216547 tRNA-transcript-chr6-144216547_1_50_+ 1–50 81.00 27.46 0.13 100.0 TRNA-TRANSCRIPT-CHR6-144216547 Leu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-26311196 tRNA-transcript-chr6-26311196_1_53_+ 1–53 1134.00 32.10 1.87 100.0 TRNA-TRANSCRIPT-CHR6-26311196 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-26538054 tRNA-transcript-chr6-26538054_1_33_+ 1–33 206562.00 95.83 340.41 99.79 TRNA-TRANSCRIPT-CHR6-26538054 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_13_33_+ 13–33 23.00 0.30 0.04 100.0 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27158127 tRNA-transcript-chr6-27158127_1_33_+ 1–33 561.00 7.42 0.92 60.85 TRNA-TRANSCRIPT-CHR6-27158127 His tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27206088 tRNA-transcript-chr6-27206088_1_33_+ 1–33 565.00 62.09 0.93 100.0 TRNA-TRANSCRIPT-CHR6-27206088 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR6-27215173 tRNA-transcript-chr6-27215173_1_19_+ 1–19 69.00 10.24 0.11 100.0 TRNA-TRANSCRIPT-CHR6-27215173 Arg tRNA frontal cortex (Tissue)