ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_14_32_+ 14–32 54.00 6.27 0.09 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16727285 tRNA-transcript-chr1-16727285_2_32_+ 2–32 213.00 27.92 0.35 100.0 TRNA-TRANSCRIPT-CHR1-16727285 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-167715488 tRNA-transcript-chr1-167715488_8_31_+ 8–31 19.00 0.79 0.03 100.0 TRNA-TRANSCRIPT-CHR1-167715488 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_18_53_+ 18–53 2.00 0.00 0.00 100.0 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16861921 tRNA-transcript-chr1-16861921_1_35_+ 1–35 41.00 0.06 0.07 3.65 TRNA-TRANSCRIPT-CHR1-16861921 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_1_32_+ 1–32 77.00 6.94 0.13 74.76 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR11-76235825 tRNA-transcript-chr11-76235825_3_32_+ 3–32 57.00 5.14 0.09 42.54 TRNA-TRANSCRIPT-CHR11-76235825 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR12-124939966 tRNA-transcript-chr12-124939966_1_53_+ 1–53 496.00 13.43 0.82 100.0 TRNA-TRANSCRIPT-CHR12-124939966 Ala tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_33_+ 1–33 35466.00 61.23 58.45 93.56 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-248874248 tRNA-transcript-chr1-248874248_1_39_+ 1–39 1309.00 2.26 2.16 100.0 TRNA-TRANSCRIPT-CHR1-248874248 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR12-98503503 tRNA-transcript-chr12-98503503_1_33_+ 1–33 33.00 8.64 0.05 100.0 TRNA-TRANSCRIPT-CHR12-98503503 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-54957869 tRNA-transcript-chr1-54957869_16_32_+ 16–32 31.00 2.76 0.05 100.0 TRNA-TRANSCRIPT-CHR1-54957869 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-65869062 tRNA-transcript-chr15-65869062_8_33_+ 8–33 31.00 0.08 0.05 100.0 TRNA-TRANSCRIPT-CHR15-65869062 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_4_33_+ 4–33 22.00 0.38 0.04 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_16_32_+ 16–32 74.00 1.29 0.12 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_29_+ 1–29 14.00 0.24 0.02 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_52_+ 1–52 802.00 13.95 1.32 97.92 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_55_+ 1–55 508.00 8.84 0.84 68.56 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR15-78860562 tRNA-transcript-chr15-78860562_1_41_+ 1–41 222.00 3.86 0.37 100.0 TRNA-TRANSCRIPT-CHR15-78860562 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_3_32_+ 3–32 335.00 10.95 0.55 42.78 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3158922 tRNA-transcript-chr16-3158922_31_53_+ 31–53 189.00 6.18 0.31 100.0 TRNA-TRANSCRIPT-CHR16-3158922 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3172048 tRNA-transcript-chr16-3172048_32_53_+ 32–53 141.00 4.36 0.23 100.0 TRNA-TRANSCRIPT-CHR16-3172048 Pro tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_13_25_+ 13–25 99.00 0.99 0.16 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_47_73_+ 47–73 3.00 0.03 0.00 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR16-3175691 tRNA-transcript-chr16-3175691_1_13_+ 1–13 322.00 3.23 0.53 100.0 TRNA-TRANSCRIPT-CHR16-3175691 Lys tRNA frontal cortex (Tissue)