ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000849527.1 ENST00000849527.1_293_307_+ 293–307 46.00 18.40 0.08 100.0 ENST00000849527 lncRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_3_32_+ 3–32 1391.00 67.59 2.29 88.71 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-121016845 tRNA-transcript-chr1-121016845_2_52_+ 2–52 1.00 0.05 0.00 100.0 TRNA-TRANSCRIPT-CHR1-121016845 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-121020729 tRNA-transcript-chr1-121020729_1_54_+ 1–54 3195.00 1.48 5.27 100.0 TRNA-TRANSCRIPT-CHR1-121020729 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_23_+ 1–23 754.00 65.97 1.24 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-145157157 tRNA-transcript-chr1-145157157_1_33_+ 1–33 87.00 7.61 0.14 100.0 TRNA-TRANSCRIPT-CHR1-145157157 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-146037061 tRNA-transcript-chr1-146037061_1_53_+ 1–53 72.00 12.24 0.12 100.0 TRNA-TRANSCRIPT-CHR1-146037061 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-148032790 tRNA-transcript-chr1-148032790_1_53_+ 1–53 311.00 9.82 0.51 100.0 TRNA-TRANSCRIPT-CHR1-148032790 Gln tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-149692805 tRNA-transcript-chr1-149692805_4_33_+ 4–33 393.00 45.17 0.65 88.12 TRNA-TRANSCRIPT-CHR1-149692805 Pseudo tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-149712552 tRNA-transcript-chr1-149712552_1_39_+ 1–39 47.00 0.02 0.08 100.0 TRNA-TRANSCRIPT-CHR1-149712552 Val tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-159141611 tRNA-transcript-chr1-159141611_3_20_+ 3–20 629.00 29.97 1.04 100.0 TRNA-TRANSCRIPT-CHR1-159141611 Arg tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_4_34_+ 4–34 450.00 16.25 0.74 98.25 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_32_53_+ 32–53 2.00 0.07 0.00 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161440825 tRNA-transcript-chr1-161440825_40_71_+ 40–71 178.00 6.43 0.29 100.0 TRNA-TRANSCRIPT-CHR1-161440825 Asp tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161448951 tRNA-transcript-chr1-161448951_1_26_+ 1–26 1135.00 49.28 1.87 100.0 TRNA-TRANSCRIPT-CHR1-161448951 Leu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_53_+ 1–53 1347.00 2.29 2.22 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_14_49_+ 14–49 821.00 1.39 1.35 85.34 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_34_+ 21–34 38.00 0.06 0.06 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_16_42_+ 16–42 232.00 0.39 0.38 84.98 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_4_33_+ 4–33 6122.00 10.39 10.09 45.92 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_1_72_+ 1–72 758.00 1.29 1.25 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161454608 tRNA-transcript-chr1-161454608_21_49_+ 21–49 28.00 0.05 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161454608 Glu tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-161480566 tRNA-transcript-chr1-161480566_1_32_+ 1–32 31.00 46.97 0.05 100.0 TRNA-TRANSCRIPT-CHR1-161480566 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16545939 tRNA-transcript-chr1-16545939_1_52_+ 1–52 34.00 0.05 0.06 97.14 TRNA-TRANSCRIPT-CHR1-16545939 Gly tRNA frontal cortex (Tissue)
TRNA-TRANSCRIPT-CHR1-16678271 tRNA-transcript-chr1-16678271_1_32_+ 1–32 536.00 62.25 0.88 100.0 TRNA-TRANSCRIPT-CHR1-16678271 Gly tRNA frontal cortex (Tissue)