ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 1825.00 0.04 3.01 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 6487.00 0.15 10.69 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 438.00 0.01 0.72 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 410.00 0.01 0.68 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 14096.00 0.32 23.23 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 417.00 0.01 0.69 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 2396.00 0.05 3.95 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 81073.00 1.82 133.61 70.99 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1701.00 0.04 2.80 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 814107.00 18.29 1341.65 97.59 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 2195.00 0.05 3.62 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1411.00 0.03 2.33 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 4.00 0.00 0.01 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 311870.00 7.01 513.96 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2223.00 0.05 3.66 74.72 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 928.00 0.02 1.53 52.58 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 46.00 0.00 0.08 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2898.00 0.07 4.78 62.47 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1313.00 0.03 2.16 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 870.00 0.02 1.43 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 2334.00 0.05 3.85 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 504692.00 39.17 831.73 100.0 SNHG14-315 lncRNA frontal cortex (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 317037.00 24.60 522.48 95.59 SNHG14-315 lncRNA frontal cortex (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 374675.00 29.08 617.46 91.45 SNHG14-315 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1361_+ 1278–1361 4622.00 1.15 7.62 98.78 SNHG5-273 lncRNA frontal cortex (Tissue)