ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2896.00 0.72 4.77 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 162346.60 40.55 267.55 48.38 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 181.00 0.05 0.30 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 451.00 0.11 0.74 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1353_+ 1278–1353 198614.36 49.61 327.32 54.22 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1056_+ 988–1056 9290.00 2.32 15.31 87.88 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1315_+ 1278–1315 58.00 0.01 0.10 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1279_1308_+ 1279–1308 2695.00 0.67 4.44 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1340_+ 1278–1340 40.00 0.01 0.07 100.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000668505.1 ENST00000668505.1_1272_1352_+ 1272–1352 3.00 0.00 0.00 60.0 SNHG5-273 lncRNA frontal cortex (Tissue)
ENST00000669673.1 ENST00000669673.1_3794_3884_+ 3794–3884 4720.00 3.08 7.78 69.67 SNHG14-323 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_34_69_+ 34–69 582.00 0.16 0.96 53.94 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_2_69_+ 2–69 346340.00 93.24 570.77 98.41 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_36_69_+ 36–69 720.00 0.19 1.19 61.02 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_1539_1602_+ 1539–1602 9062.00 2.44 14.93 80.51 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670680.1 ENST00000670680.1_10_70_+ 10–70 519.00 0.14 0.86 100.0 MEG8-251 lncRNA frontal cortex (Tissue)
ENST00000670697.1 ENST00000670697.1_226_313_+ 226–313 1.00 0.00 0.00 100.0 SNHG14-336 lncRNA frontal cortex (Tissue)
ENST00000670697.1 ENST00000670697.1_233_310_+ 233–310 85695.00 69.73 141.23 90.17 SNHG14-336 lncRNA frontal cortex (Tissue)
ENST00000670697.1 ENST00000670697.1_232_313_+ 232–313 32790.00 26.68 54.04 50.42 SNHG14-336 lncRNA frontal cortex (Tissue)
ENST00000671491.1 ENST00000671491.1_1778_1868_+ 1778–1868 60402.00 82.78 99.54 97.25 SNHG14-341 lncRNA frontal cortex (Tissue)
ENST00000676514.1 ENST00000676514.1_1978_2054_+ 1978–2054 220.00 15.17 0.36 100.0 NCL-211 retained intron frontal cortex (Tissue)
ENST00000679646.1 ENST00000679646.1_899_921_+ 899–921 544.00 9.48 0.90 100.0 FMN2-209 protein coding CDS not defined frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1449_1480_+ 1449–1480 4.00 0.05 0.01 100.0 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1409_1423_+ 1409–1423 550.00 6.57 0.91 67.57 LINC02739-203 lncRNA frontal cortex (Tissue)
ENST00000685142.3 ENST00000685142.3_1421_1436_+ 1421–1436 858.00 10.25 1.41 100.0 LINC02739-203 lncRNA frontal cortex (Tissue)