ENCFF001RMM

Library Details

Organism: Homo Sapiens
Biosample: frontal cortex (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFS
Description: Part of ENCODE experiment ENCSR000AFS. The libraries contained in this experiment come from human fetal frontal cortex tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666663.1 ENST00000666663.1_35_81_+ 35–81 5231.00 3.46 8.62 100.0 SNHG14-306 lncRNA frontal cortex (Tissue)
ENST00000666663.1 ENST00000666663.1_59_82_+ 59–82 4701.00 3.11 7.75 100.0 SNHG14-306 lncRNA frontal cortex (Tissue)
ENST00000666663.1 ENST00000666663.1_2_82_+ 2–82 95179.00 62.96 156.85 98.01 SNHG14-306 lncRNA frontal cortex (Tissue)
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 5915.00 3.91 9.75 100.0 SNHG14-306 lncRNA frontal cortex (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 101.00 1.26 0.17 100.0 ENST00000666735 lncRNA frontal cortex (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 3223.00 40.22 5.31 100.0 ENST00000666735 lncRNA frontal cortex (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 10902.00 83.16 17.97 100.0 MEG8-242 lncRNA frontal cortex (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 25259.38 19.59 41.63 23.32 SNHG14-312 lncRNA frontal cortex (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 82525.14 63.99 136.00 76.18 SNHG14-312 lncRNA frontal cortex (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 3347.00 2.60 5.52 100.0 SNHG14-312 lncRNA frontal cortex (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 333.00 0.20 0.55 100.0 MEG8-244 lncRNA frontal cortex (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 608.00 0.36 1.00 100.0 MEG8-244 lncRNA frontal cortex (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 164189.00 98.28 270.58 99.89 MEG8-244 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 1156.00 0.03 1.91 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 10.00 0.00 0.02 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 7816.00 0.18 12.88 99.34 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 752.36 0.02 1.24 42.63 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 4067.00 0.09 6.70 85.87 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 2281543.00 51.25 3759.98 99.07 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1306.00 0.03 2.15 70.25 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 106041.00 2.38 174.76 99.44 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 10626.00 0.24 17.51 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 533449.00 11.98 879.12 99.76 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 694.00 0.02 1.14 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 3502.00 0.08 5.77 100.0 SNHG1-248 lncRNA frontal cortex (Tissue)