ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 48359.00 4.14 89.44 95.81 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 184512.00 15.81 341.27 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 5637.00 0.48 10.43 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 34120.00 2.92 63.11 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 1.00 0.00 0.00 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1118_+ 1048–1118 367.00 0.03 0.68 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000651140.1 ENST00000651140.1_696_716_+ 696–716 1733.00 13.19 3.21 100.0 FTX-219 lncRNA cerebellum (Tissue)
ENST00000651140.1 ENST00000651140.1_890_912_+ 890–912 6232.00 47.45 11.53 81.87 FTX-219 lncRNA cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5199_5247_+ 5199–5247 347.00 4.14 0.64 53.63 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5233_5247_+ 5233–5247 137.00 1.63 0.25 23.62 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5174_+ 5163–5174 536.00 6.39 0.99 31.94 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5201_5247_+ 5201–5247 300.00 3.58 0.55 46.37 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5177_+ 5163–5177 2730.00 32.57 5.05 94.69 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5214_5247_+ 5214–5247 246.00 2.93 0.46 100.0 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5163_5185_+ 5163–5185 179.00 2.14 0.33 100.0 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651323.1 ENST00000651323.1_5230_5247_+ 5230–5247 1303.00 15.55 2.41 100.0 CTC1-214 protein coding cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_45_+ 6–45 1245.00 1.23 2.30 72.93 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_57_88_+ 57–88 4007.00 3.95 7.41 99.04 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_55_+ 6–55 3297.00 3.25 6.10 100.0 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_33_+ 6–33 5662.00 5.58 10.47 53.96 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_70_88_+ 70–88 940.00 0.93 1.74 100.0 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_75_+ 6–75 1978.00 1.95 3.66 100.0 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_79_+ 6–79 468.00 0.46 0.87 100.0 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_28_+ 6–28 5095.00 5.02 9.42 100.0 ENST00000651540 lncRNA cerebellum (Tissue)
ENST00000651540.1 ENST00000651540.1_6_88_+ 6–88 1796.00 1.77 3.32 100.0 ENST00000651540 lncRNA cerebellum (Tissue)