ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 29613.00 5.53 54.77 52.95 SNHG14-224 lncRNA cerebellum (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 1698.51 31.59 3.14 70.86 5S_rRNA.20-201 rRNA pseudogene cerebellum (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 910.00 9.11 1.68 100.0 HSPA9-211 retained intron cerebellum (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 3246.00 32.49 6.00 56.44 HSPA9-211 retained intron cerebellum (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 10255.00 81.75 18.97 100.0 DNM3OS-205 lncRNA cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 467.00 0.04 0.86 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 227.00 0.02 0.42 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 2095.00 0.18 3.87 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 713.00 0.06 1.32 65.47 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 7535.00 0.65 13.94 94.44 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 190.00 0.02 0.35 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 529.00 0.05 0.98 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1321.00 0.11 2.44 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 762367.00 65.31 1410.08 99.77 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2080.00 0.18 3.85 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 3046.00 0.26 5.63 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 2297.00 0.20 4.25 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1517.00 0.13 2.81 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 2431.00 0.21 4.50 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 221.00 0.02 0.41 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 306.00 0.03 0.57 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 788.00 0.07 1.46 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 10138.00 0.87 18.75 83.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 34514.00 2.96 63.84 100.0 GAS5-230 retained intron cerebellum (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 25982.00 2.23 48.06 100.0 GAS5-230 retained intron cerebellum (Tissue)