ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000570843.1 ENST00000570843.1_7_38_+ 7–38 12466.00 77.38 23.06 100.0 ENST00000570843 lncRNA cerebellum (Tissue)
ENST00000572453.1 ENST00000572453.1_1973_1994_+ 1973–1994 5180.00 68.36 9.58 100.0 MIR497HG-207 lncRNA cerebellum (Tissue)
ENST00000577164.2 ENST00000577164.2_444_465_+ 444–465 201678.00 99.38 373.02 99.69 MIR22HG-212 lncRNA cerebellum (Tissue)
ENST00000577887.1 ENST00000577887.1_1_51_+ 1–51 1022.00 1.03 1.89 72.07 SNORD53B-201 snoRNA cerebellum (Tissue)
ENST00000577887.1 ENST00000577887.1_1_76_+ 1–76 91832.00 92.94 169.85 96.34 SNORD53B-201 snoRNA cerebellum (Tissue)
ENST00000577887.1 ENST00000577887.1_1_53_+ 1–53 396.00 0.40 0.73 27.93 SNORD53B-201 snoRNA cerebellum (Tissue)
ENST00000578036.5 ENST00000578036.5_3605_3616_+ 3605–3616 494.00 87.43 0.91 100.0 ENST00000578036 lncRNA cerebellum (Tissue)
ENST00000578181.1 ENST00000578181.1_477_541_+ 477–541 5175.00 86.83 9.57 100.0 RPL23A-207 protein coding cerebellum (Tissue)
ENST00000578242.1 ENST00000578242.1_11_31_+ 11–31 4623.00 89.59 8.55 100.0 MIR744-201 miRNA cerebellum (Tissue)
ENST00000578683.1 ENST00000578683.1_11_30_+ 11–30 376.00 70.15 0.70 100.0 MIR378C-201 miRNA cerebellum (Tissue)
ENST00000579003.2 ENST00000579003.2_1219_1238_+ 1219–1238 1781.00 61.58 3.29 72.31 MIR142HG-201 lncRNA cerebellum (Tissue)
ENST00000579003.2 ENST00000579003.2_1257_1279_+ 1257–1279 14.00 0.48 0.03 100.0 MIR142HG-201 lncRNA cerebellum (Tissue)
ENST00000579003.2 ENST00000579003.2_1221_1241_+ 1221–1241 238.00 8.23 0.44 19.75 MIR142HG-201 lncRNA cerebellum (Tissue)
ENST00000580533.1 ENST00000580533.1_1_91_+ 1–91 2349.00 8.93 4.34 100.0 SNORD3C-201 snoRNA cerebellum (Tissue)
ENST00000580755.1 ENST00000580755.1_131_197_+ 131–197 281.83 0.18 0.52 63.33 RPL23A-208 retained intron cerebellum (Tissue)
ENST00000580755.1 ENST00000580755.1_131_193_+ 131–193 37263.00 23.55 68.92 91.39 RPL23A-208 retained intron cerebellum (Tissue)
ENST00000580755.1 ENST00000580755.1_131_199_+ 131–199 155.85 0.10 0.29 47.81 RPL23A-208 retained intron cerebellum (Tissue)
ENST00000580755.1 ENST00000580755.1_132_190_+ 132–190 118699.00 75.00 219.55 87.8 RPL23A-208 retained intron cerebellum (Tissue)
ENST00000581072.6 ENST00000581072.6_810_831_+ 810–831 2.00 0.76 0.00 100.0 MIR133A1HG-202 lncRNA cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_509_570_+ 509–570 8462.00 4.16 15.65 47.08 RPL17-211 retained intron cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_127_189_+ 127–189 26178.00 12.88 48.42 48.5 RPL17-211 retained intron cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_127_196_+ 127–196 664.00 0.33 1.23 100.0 RPL17-211 retained intron cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_127_192_+ 127–192 108148.00 53.22 200.03 93.84 RPL17-211 retained intron cerebellum (Tissue)
ENST00000581305.1 ENST00000581305.1_509_573_+ 509–573 50351.00 24.78 93.13 96.18 RPL17-211 retained intron cerebellum (Tissue)
ENST00000582320.4 ENST00000582320.4_575_600_+ 575–600 804.00 9.47 1.49 100.0 ENST00000582320 lncRNA cerebellum (Tissue)