ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000554988.2 ENST00000554988.2_275_368_+ 275–368 2192.00 13.08 4.05 100.0 ENST00000554988 lncRNA cerebellum (Tissue)
ENST00000557108.6 ENST00000557108.6_4551_4587_+ 4551–4587 1224.00 0.75 2.26 100.0 SNHG14-220 retained intron cerebellum (Tissue)
ENST00000557108.6 ENST00000557108.6_4526_4587_+ 4526–4587 57729.00 35.40 106.78 100.0 SNHG14-220 retained intron cerebellum (Tissue)
ENST00000557108.6 ENST00000557108.6_1419_1490_+ 1419–1490 94814.00 58.15 175.37 100.0 SNHG14-220 retained intron cerebellum (Tissue)
ENST00000557108.6 ENST00000557108.6_4525_4590_+ 4525–4590 1206.00 0.74 2.23 100.0 SNHG14-220 retained intron cerebellum (Tissue)
ENST00000559466.1 ENST00000559466.1_665_676_+ 665–676 2257.00 99.03 4.17 100.0 TEKT4P2-201 transcribed unprocessed pseudogene cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_316_344_+ 316–344 358.00 0.14 0.66 100.0 RPL4-202 retained intron cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_276_321_+ 276–321 30.00 0.01 0.06 100.0 RPL4-202 retained intron cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_276_344_+ 276–344 242022.00 95.98 447.64 99.05 RPL4-202 retained intron cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_276_317_+ 276–317 256.00 0.10 0.47 100.0 RPL4-202 retained intron cerebellum (Tissue)
ENST00000561554.5 ENST00000561554.5_311_344_+ 311–344 663.00 0.26 1.23 100.0 RPL4-202 retained intron cerebellum (Tissue)
ENST00000563103.1 ENST00000563103.1_221_256_+ 221–256 12.00 0.06 0.02 100.0 ENST00000563103 lncRNA cerebellum (Tissue)
ENST00000564647.5 ENST00000564647.5_345_386_+ 345–386 101.00 1.45 0.19 100.0 RPL4-207 retained intron cerebellum (Tissue)
ENST00000564647.5 ENST00000564647.5_318_386_+ 318–386 4541.00 65.22 8.40 100.0 RPL4-207 retained intron cerebellum (Tissue)
ENST00000565336.1 ENST00000565336.1_451_487_+ 451–487 14249.00 78.70 26.35 96.52 ENST00000565336 lncRNA cerebellum (Tissue)
ENST00000565336.1 ENST00000565336.1_446_487_+ 446–487 1522.00 8.41 2.82 73.21 ENST00000565336 lncRNA cerebellum (Tissue)
ENST00000565907.1 ENST00000565907.1_307_381_+ 307–381 461575.00 80.94 853.73 84.95 RBMX-210 retained intron cerebellum (Tissue)
ENST00000565907.1 ENST00000565907.1_307_354_+ 307–354 3724.00 0.65 6.89 100.0 RBMX-210 retained intron cerebellum (Tissue)
ENST00000565907.1 ENST00000565907.1_307_388_+ 307–388 909.00 0.16 1.68 100.0 RBMX-210 retained intron cerebellum (Tissue)
ENST00000565907.1 ENST00000565907.1_307_350_+ 307–350 6273.00 1.10 11.60 100.0 RBMX-210 retained intron cerebellum (Tissue)
ENST00000567229.5 ENST00000567229.5_485_573_+ 485–573 6396.00 64.36 11.83 100.0 RPL4-214 retained intron cerebellum (Tissue)
ENST00000567229.5 ENST00000567229.5_1097_1162_+ 1097–1162 644.00 6.48 1.19 100.0 RPL4-214 retained intron cerebellum (Tissue)
ENST00000569473.1 ENST00000569473.1_47_96_+ 47–96 587.00 2.35 1.09 100.0 POLG-DT-202 lncRNA cerebellum (Tissue)
ENST00000569473.1 ENST00000569473.1_59_96_+ 59–96 10793.36 43.12 19.96 65.03 POLG-DT-202 lncRNA cerebellum (Tissue)
ENST00000569473.1 ENST00000569473.1_61_96_+ 61–96 6405.47 25.59 11.85 39.96 POLG-DT-202 lncRNA cerebellum (Tissue)