ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000582320.4 ENST00000582320.4_575_597_+ 575–597 4923.00 57.97 9.11 79.62 ENST00000582320 lncRNA cerebellum (Tissue)
ENST00000582320.4 ENST00000582320.4_395_417_+ 395–417 1150.00 13.54 2.13 100.0 ENST00000582320 lncRNA cerebellum (Tissue)
ENST00000582588.1 ENST00000582588.1_258_286_+ 258–286 4895.00 7.57 9.05 100.0 RPL17-214 retained intron cerebellum (Tissue)
ENST00000582588.1 ENST00000582588.1_258_320_+ 258–320 30369.45 46.95 56.17 54.41 RPL17-214 retained intron cerebellum (Tissue)
ENST00000582588.1 ENST00000582588.1_258_318_+ 258–318 25272.58 39.07 46.74 49.73 RPL17-214 retained intron cerebellum (Tissue)
ENST00000583861.1 ENST00000583861.1_27_62_+ 27–62 537.00 0.06 0.99 100.0 SNORD43-201 snoRNA cerebellum (Tissue)
ENST00000583861.1 ENST00000583861.1_1_62_+ 1–62 873505.00 99.03 1615.64 99.96 SNORD43-201 snoRNA cerebellum (Tissue)
ENST00000583861.1 ENST00000583861.1_12_62_+ 12–62 618.00 0.07 1.14 100.0 SNORD43-201 snoRNA cerebellum (Tissue)
ENST00000584249.1 ENST00000584249.1_60_79_+ 60–79 1256.00 48.74 2.32 100.0 MIR151B-201 miRNA cerebellum (Tissue)
ENST00000584923.1 ENST00000584923.1_153_216_+ 153–216 100.00 0.34 0.18 100.0 SNORD3A-201 snoRNA cerebellum (Tissue)
ENST00000585078.1 ENST00000585078.1_1_83_+ 1–83 12147.00 81.08 22.47 100.0 SNORD92-201 snoRNA cerebellum (Tissue)
ENST00000585881.5 ENST00000585881.5_140_162_+ 140–162 19895.00 63.96 36.80 100.0 NSRP1-214 protein coding cerebellum (Tissue)
ENST00000585881.5 ENST00000585881.5_104_126_+ 104–126 7306.00 23.49 13.51 82.82 NSRP1-214 protein coding cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6641_+ 6619–6641 1258.00 14.60 2.33 63.34 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6337_6420_+ 6337–6420 238.00 2.76 0.44 100.0 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6314_6334_+ 6314–6334 1300.00 15.09 2.40 93.59 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6462_6481_+ 6462–6481 1566.00 18.18 2.90 77.33 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000587762.2 ENST00000587762.2_6619_6638_+ 6619–6638 2859.00 33.19 5.29 89.51 MIR23AHG-201 lncRNA cerebellum (Tissue)
ENST00000590797.5 ENST00000590797.5_2254_2275_+ 2254–2275 3.00 50.00 0.01 100.0 MIR122HG-201 lncRNA cerebellum (Tissue)
ENST00000591345.5 ENST00000591345.5_1414_1429_+ 1414–1429 28.00 28.57 0.05 100.0 ODAD3-204 nonsense mediated decay cerebellum (Tissue)
ENST00000592790.1 ENST00000592790.1_3381_3401_+ 3381–3401 267.00 0.71 0.49 100.0 VMP1-217 retained intron cerebellum (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3402_+ 3343–3402 8.00 0.02 0.01 100.0 VMP1-217 retained intron cerebellum (Tissue)
ENST00000592790.1 ENST00000592790.1_3343_3366_+ 3343–3366 22499.00 60.20 41.61 64.42 VMP1-217 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_279_+ 236–279 993.00 0.08 1.84 100.0 C19orf48P-203 retained intron cerebellum (Tissue)
ENST00000595794.5 ENST00000595794.5_236_318_+ 236–318 944136.40 71.77 1746.28 78.37 C19orf48P-203 retained intron cerebellum (Tissue)