ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000437139.7 ENST00000437139.7_1182_1267_+ 1182–1267 237.00 7.29 0.44 100.0 TMEM107-204 protein coding cerebellum (Tissue)
ENST00000448136.6 ENST00000448136.6_1027_1095_+ 1027–1095 1365.00 61.60 2.52 91.3 SNHG16-201 lncRNA cerebellum (Tissue)
ENST00000448136.6 ENST00000448136.6_1026_1098_+ 1026–1098 380.00 17.15 0.70 100.0 SNHG16-201 lncRNA cerebellum (Tissue)
ENST00000453082.5 ENST00000453082.5_267_347_+ 267–347 6544.00 12.72 12.10 100.0 SNHG14-207 lncRNA cerebellum (Tissue)
ENST00000458770.1 ENST00000458770.1_7_74_+ 7–74 192328.00 93.46 355.73 97.88 SNORD105B-201 snoRNA cerebellum (Tissue)
ENST00000458838.1 ENST00000458838.1_8_75_+ 8–75 3592.00 44.78 6.64 60.11 SNORD121B-201 snoRNA cerebellum (Tissue)
ENST00000458892.1 ENST00000458892.1_5_39_+ 5–39 425.00 0.27 0.79 100.0 SNORD127-201 snoRNA cerebellum (Tissue)
ENST00000458892.1 ENST00000458892.1_5_80_+ 5–80 151220.00 96.03 279.70 99.34 SNORD127-201 snoRNA cerebellum (Tissue)
ENST00000458893.1 ENST00000458893.1_3_64_+ 3–64 26385.00 91.75 48.80 100.0 SNORD42B-201 snoRNA cerebellum (Tissue)
ENST00000459254.1 ENST00000459254.1_69_90_+ 69–90 159.00 0.34 0.29 100.0 RNY4P25-201 misc RNA cerebellum (Tissue)
ENST00000459386.1 ENST00000459386.1_9_73_+ 9–73 1217.00 66.25 2.25 100.0 SNORD121A-201 snoRNA cerebellum (Tissue)
ENST00000459475.1 ENST00000459475.1_4_72_+ 4–72 10519.00 76.99 19.46 91.94 SNORD126-201 snoRNA cerebellum (Tissue)
ENST00000459475.1 ENST00000459475.1_4_75_+ 4–75 2513.00 18.39 4.65 58.94 SNORD126-201 snoRNA cerebellum (Tissue)
ENST00000459577.1 ENST00000459577.1_12_91_+ 12–91 43922.00 92.19 81.24 96.1 SNORD124-201 snoRNA cerebellum (Tissue)
ENST00000461448.6 ENST00000461448.6_522_587_+ 522–587 38.00 2.34 0.07 100.0 SNHG12-201 retained intron cerebellum (Tissue)
ENST00000467105.1 ENST00000467105.1_582_665_+ 582–665 4642.00 33.55 8.59 100.0 RPL3-212 retained intron cerebellum (Tissue)
ENST00000467105.1 ENST00000467105.1_581_668_+ 581–668 5268.00 38.08 9.74 92.71 RPL3-212 retained intron cerebellum (Tissue)
ENST00000469129.1 ENST00000469129.1_822_842_+ 822–842 74566.00 97.15 137.92 100.0 SMC1A-204 retained intron cerebellum (Tissue)
ENST00000471759.5 ENST00000471759.5_372_449_+ 372–449 27487.00 84.40 50.84 97.83 RABGGTB-208 protein coding CDS not defined cerebellum (Tissue)
ENST00000481456.1 ENST00000481456.1_825_898_+ 825–898 10458.00 45.27 19.34 78.96 DDX39B-219 retained intron cerebellum (Tissue)
ENST00000481456.1 ENST00000481456.1_847_901_+ 847–901 1437.00 6.22 2.66 100.0 DDX39B-219 retained intron cerebellum (Tissue)
ENST00000481456.1 ENST00000481456.1_862_898_+ 862–898 3483.00 15.08 6.44 100.0 DDX39B-219 retained intron cerebellum (Tissue)
ENST00000484599.1 ENST00000484599.1_580_645_+ 580–645 4502.00 68.91 8.33 100.0 RPS8-206 protein coding CDS not defined cerebellum (Tissue)
ENST00000484610.5 ENST00000484610.5_361_433_+ 361–433 117383.00 94.50 217.11 99.5 RPL13-207 retained intron cerebellum (Tissue)
ENST00000484610.5 ENST00000484610.5_392_433_+ 392–433 2418.00 1.95 4.47 100.0 RPL13-207 retained intron cerebellum (Tissue)