ENCFF001RML

Library Details

Organism: Homo Sapiens
Biosample: cerebellum (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFQ
Description: Part of ENCODE experiment ENCSR000AFQ. The libraries contained in this experiment come from human fetal cerebellum tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000410413.1 ENST00000410413.1_33_65_+ 33–65 808.00 0.71 1.49 100.0 SNORD19C-201 snoRNA cerebellum (Tissue)
ENST00000410413.1 ENST00000410413.1_2_65_+ 2–65 107856.00 95.05 199.49 98.18 SNORD19C-201 snoRNA cerebellum (Tissue)
ENST00000410433.1 ENST00000410433.1_7_54_+ 7–54 6186.00 2.90 11.44 100.0 SNORD12B-201 snoRNA cerebellum (Tissue)
ENST00000410433.1 ENST00000410433.1_31_84_+ 31–84 516.00 0.24 0.95 100.0 SNORD12B-201 snoRNA cerebellum (Tissue)
ENST00000410433.1 ENST00000410433.1_7_84_+ 7–84 198708.00 93.24 367.53 99.24 SNORD12B-201 snoRNA cerebellum (Tissue)
ENST00000410669.1 ENST00000410669.1_1_32_+ 1–32 4435.00 23.73 8.20 100.0 Y_RNA.609-201 misc RNA cerebellum (Tissue)
ENST00000410717.1 ENST00000410717.1_15_31_+ 15–31 858.00 26.50 1.59 100.0 Y_RNA.612-201 misc RNA cerebellum (Tissue)
ENST00000411292.1 ENST00000411292.1_6_82_+ 6–82 2277.00 1.31 4.21 100.0 SNORD71-201 snoRNA cerebellum (Tissue)
ENST00000411292.1 ENST00000411292.1_51_79_+ 51–79 1493.00 0.86 2.76 100.0 SNORD71-201 snoRNA cerebellum (Tissue)
ENST00000411292.1 ENST00000411292.1_7_79_+ 7–79 165593.00 95.33 306.28 99.35 SNORD71-201 snoRNA cerebellum (Tissue)
ENST00000413053.2 ENST00000413053.2_1985_2007_+ 1985–2007 6039.00 20.94 11.17 61.11 MIR194-2HG-201 lncRNA cerebellum (Tissue)
ENST00000413053.2 ENST00000413053.2_1984_2004_+ 1984–2004 21498.00 74.55 39.76 89.71 MIR194-2HG-201 lncRNA cerebellum (Tissue)
ENST00000415386.2 ENST00000415386.2_302_374_+ 302–374 44.00 0.78 0.08 100.0 LINC01783-201 lncRNA cerebellum (Tissue)
ENST00000415804.2 ENST00000415804.2_467_487_+ 467–487 79.00 91.86 0.15 100.0 RPS7P15-201 processed pseudogene cerebellum (Tissue)
ENST00000426867.1 ENST00000426867.1_1_86_+ 1–86 441.00 3.30 0.82 100.0 SNORD62B-201 snoRNA cerebellum (Tissue)
ENST00000426867.1 ENST00000426867.1_72_86_+ 72–86 1270.00 9.52 2.35 100.0 SNORD62B-201 snoRNA cerebellum (Tissue)
ENST00000426867.1 ENST00000426867.1_58_86_+ 58–86 61.00 0.46 0.11 100.0 SNORD62B-201 snoRNA cerebellum (Tissue)
ENST00000426867.1 ENST00000426867.1_26_86_+ 26–86 532.00 3.99 0.98 100.0 SNORD62B-201 snoRNA cerebellum (Tissue)
ENST00000426867.1 ENST00000426867.1_1_35_+ 1–35 7806.00 58.50 14.44 95.61 SNORD62B-201 snoRNA cerebellum (Tissue)
ENST00000432845.1 ENST00000432845.1_2382_2409_+ 2382–2409 160.00 94.12 0.30 100.0 MRPL32-203 nonsense mediated decay cerebellum (Tissue)
ENST00000436739.2 ENST00000436739.2_403_416_+ 403–416 1600.00 97.44 2.96 100.0 ENST00000436739 lncRNA cerebellum (Tissue)
ENST00000437139.7 ENST00000437139.7_1209_1267_+ 1209–1267 490.00 15.07 0.91 58.33 TMEM107-204 protein coding cerebellum (Tissue)
ENST00000437139.7 ENST00000437139.7_1225_1267_+ 1225–1267 1.00 0.03 0.00 100.0 TMEM107-204 protein coding cerebellum (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1225_+ 1182–1225 78.00 2.40 0.14 100.0 TMEM107-204 protein coding cerebellum (Tissue)
ENST00000437139.7 ENST00000437139.7_1182_1238_+ 1182–1238 12.00 0.37 0.02 34.29 TMEM107-204 protein coding cerebellum (Tissue)