ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000668048.2 ENST00000668048.2_287_322_+ 287–322 563.00 0.02 0.98 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2173_+ 2157–2173 9096.00 0.30 15.79 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_258_296_+ 258–296 772.00 0.03 1.34 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2184_2223_+ 2184–2223 1887.00 0.06 3.27 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_258_324_+ 258–324 130303.00 4.28 226.13 73.49 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2507_2560_+ 2507–2560 1600.00 0.05 2.78 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_524_594_+ 524–594 328892.00 10.79 570.76 97.13 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2514_2560_+ 2514–2560 1676.00 0.06 2.91 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_1936_1982_+ 1936–1982 1260.00 0.04 2.19 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_517_596_+ 517–596 6.00 0.00 0.01 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_806_874_+ 806–874 149398.00 4.90 259.26 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_1953_1982_+ 1953–1982 2365.00 0.08 4.10 75.75 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_523_579_+ 523–579 1084.21 0.04 1.88 51.58 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_565_594_+ 565–594 150.00 0.00 0.26 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_1949_1982_+ 1949–1982 2428.00 0.08 4.21 58.95 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2160_2223_+ 2160–2223 1408.00 0.05 2.44 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1978_+ 1921–1978 2120.00 0.07 3.68 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1265_+ 1194–1265 895.00 0.03 1.55 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668419.1 ENST00000668419.1_3471_3561_+ 3471–3561 202297.00 50.42 351.06 100.0 SNHG14-315 lncRNA heart (Tissue)
ENST00000668419.1 ENST00000668419.1_1471_1561_+ 1471–1561 79981.00 19.94 138.80 92.88 SNHG14-315 lncRNA heart (Tissue)
ENST00000668419.1 ENST00000668419.1_2_92_+ 2–92 75604.00 18.84 131.20 87.03 SNHG14-315 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1322_+ 1278–1322 2396.00 1.21 4.16 100.0 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1351_+ 1278–1351 46453.26 23.44 80.61 31.21 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_1278_1337_+ 1278–1337 857.00 0.43 1.49 100.0 SNHG5-273 lncRNA heart (Tissue)
ENST00000668505.1 ENST00000668505.1_988_1033_+ 988–1033 1092.00 0.55 1.90 100.0 SNHG5-273 lncRNA heart (Tissue)