ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000666663.1 ENST00000666663.1_42_82_+ 42–82 288.00 3.13 0.50 100.0 SNHG14-306 lncRNA heart (Tissue)
ENST00000666735.2 ENST00000666735.2_72_128_+ 72–128 110.00 1.92 0.19 100.0 ENST00000666735 lncRNA heart (Tissue)
ENST00000666735.2 ENST00000666735.2_77_128_+ 77–128 1663.00 29.00 2.89 100.0 ENST00000666735 lncRNA heart (Tissue)
ENST00000666972.1 ENST00000666972.1_2488_2551_+ 2488–2551 5665.00 79.61 9.83 100.0 MEG8-242 lncRNA heart (Tissue)
ENST00000667788.1 ENST00000667788.1_3_90_+ 3–90 11098.55 19.65 19.26 24.81 SNHG14-312 lncRNA heart (Tissue)
ENST00000667788.1 ENST00000667788.1_2_92_+ 2–92 32767.38 58.01 56.86 73.26 SNHG14-312 lncRNA heart (Tissue)
ENST00000667788.1 ENST00000667788.1_16_92_+ 16–92 1262.00 2.23 2.19 100.0 SNHG14-312 lncRNA heart (Tissue)
ENST00000667814.1 ENST00000667814.1_36_68_+ 36–68 322.00 0.16 0.56 100.0 MEG8-244 lncRNA heart (Tissue)
ENST00000667814.1 ENST00000667814.1_2_32_+ 2–32 549.00 0.28 0.95 100.0 MEG8-244 lncRNA heart (Tissue)
ENST00000667814.1 ENST00000667814.1_2_68_+ 2–68 192296.00 98.20 333.71 99.8 MEG8-244 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_295_321_+ 295–321 6167.00 0.20 10.70 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2490_2559_+ 2490–2559 7.00 0.00 0.01 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2195_2223_+ 2195–2223 7369.00 0.24 12.79 98.07 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_523_581_+ 523–581 988.87 0.03 1.72 47.04 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_1946_1982_+ 1946–1982 3261.00 0.11 5.66 82.68 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_1921_1982_+ 1921–1982 1709944.00 56.12 2967.42 98.76 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2522_2560_+ 2522–2560 1050.00 0.03 1.82 74.52 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2157_2223_+ 2157–2223 85085.00 2.79 147.66 99.22 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2532_2560_+ 2532–2560 10082.00 0.33 17.50 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_2496_2560_+ 2496–2560 382192.00 12.54 663.25 99.68 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_523_570_+ 523–570 344.00 0.01 0.60 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_847_874_+ 847–874 6131.00 0.20 10.64 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_523_549_+ 523–549 3309.00 0.11 5.74 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_1194_1268_+ 1194–1268 2952.00 0.10 5.12 100.0 SNHG1-248 lncRNA heart (Tissue)
ENST00000668048.2 ENST00000668048.2_523_584_+ 523–584 667.00 0.02 1.16 100.0 SNHG1-248 lncRNA heart (Tissue)