ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000251287.3 ENST00000251287.3_396_409_+ 396–409 4.00 2.63 0.01 100.0 HCN2-201 protein coding heart (Tissue)
ENST00000261038.6 ENST00000261038.6_3100_3122_+ 3100–3122 3577.00 96.03 6.21 100.0 SLC49A4-201 protein coding heart (Tissue)
ENST00000284727.9 ENST00000284727.9_2255_2286_+ 2255–2286 76.00 4.04 0.13 100.0 ATP5MC3-201 protein coding heart (Tissue)
ENST00000302506.8 ENST00000302506.8_1928_1942_+ 1928–1942 366.00 95.06 0.64 100.0 CDC25A-201 protein coding heart (Tissue)
ENST00000320776.5 ENST00000320776.5_289_301_+ 289–301 819.00 85.40 1.42 100.0 BLOC1S4-201 protein coding heart (Tissue)
ENST00000321990.5 ENST00000321990.5_6301_6324_+ 6301–6324 488.00 8.96 0.85 100.0 ATAD5-201 protein coding heart (Tissue)
ENST00000325089.7 ENST00000325089.7_9_20_+ 9–20 504.00 31.02 0.87 100.0 SLITRK5-201 protein coding heart (Tissue)
ENST00000325418.5 ENST00000325418.5_207_220_+ 207–220 81.00 56.25 0.14 100.0 HASPIN-201 protein coding heart (Tissue)
ENST00000327423.11 ENST00000327423.11_9327_9339_+ 9327–9339 2554.00 95.80 4.43 100.0 PRR14L-201 protein coding heart (Tissue)
ENST00000336854.9 ENST00000336854.9_1124_1136_+ 1124–1136 1273.00 98.15 2.21 100.0 ATG101-201 protein coding heart (Tissue)
ENST00000345127.9 ENST00000345127.9_4554_4567_+ 4554–4567 356.00 78.59 0.62 100.0 PRICKLE1-201 protein coding heart (Tissue)
ENST00000347538.2 ENST00000347538.2_59_81_+ 59–81 899676.00 98.28 1561.29 99.7 MIR133A2-201 miRNA heart (Tissue)
ENST00000358769.7 ENST00000358769.7_52_66_+ 52–66 4.00 28.57 0.01 100.0 PBLD-204 protein coding heart (Tissue)
ENST00000360737.4 ENST00000360737.4_3384_3405_+ 3384–3405 425633.00 92.28 738.64 99.03 MIRLET7BHG-201 lncRNA heart (Tissue)
ENST00000360737.4 ENST00000360737.4_4323_4344_+ 4323–4344 19538.00 4.24 33.91 90.58 MIRLET7BHG-201 lncRNA heart (Tissue)
ENST00000362103.4 ENST00000362103.4_40_61_+ 40–61 59.00 100.00 0.10 100.0 MIR375-201 miRNA heart (Tissue)
ENST00000362104.3 ENST00000362104.3_59_80_+ 59–80 20818.00 7.76 36.13 100.0 MIR30E-201 miRNA heart (Tissue)
ENST00000362104.3 ENST00000362104.3_17_40_+ 17–40 235980.00 88.01 409.52 100.0 MIR30E-201 miRNA heart (Tissue)
ENST00000362111.4 ENST00000362111.4_42_63_+ 42–63 506.00 54.23 0.88 100.0 MIR29A-201 miRNA heart (Tissue)
ENST00000362114.1 ENST00000362114.1_18_39_+ 18–39 5971.00 88.20 10.36 100.0 MIR345-201 miRNA heart (Tissue)
ENST00000362117.1 ENST00000362117.1_10_31_+ 10–31 194998.00 99.13 338.40 100.0 MIR16-2-201 miRNA heart (Tissue)
ENST00000362125.3 ENST00000362125.3_16_37_+ 16–37 5848.00 85.55 10.15 100.0 MIR340-201 miRNA heart (Tissue)
ENST00000362125.3 ENST00000362125.3_58_80_+ 58–80 559.00 8.18 0.97 100.0 MIR340-201 miRNA heart (Tissue)
ENST00000362127.2 ENST00000362127.2_50_71_+ 50–71 10539.00 88.48 18.29 100.0 MIR107-201 miRNA heart (Tissue)
ENST00000362150.3 ENST00000362150.3_49_70_+ 49–70 15772.00 92.13 27.37 94.27 MIR381-201 miRNA heart (Tissue)