ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000650796.1 ENST00000650796.1_2858_2910_+ 2858–2910 278.00 0.02 0.48 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_709_770_+ 709–770 1730.00 0.12 3.00 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1648_1723_+ 1648–1723 849.00 0.06 1.47 62.02 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_137_198_+ 137–198 8680.00 0.62 15.06 96.85 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1418_+ 1391–1418 106.00 0.01 0.18 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2663_+ 2631–2663 419.00 0.03 0.73 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1103_+ 1048–1103 1581.00 0.11 2.74 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1108_+ 1048–1108 1067093.00 76.13 1851.83 99.78 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1075_1108_+ 1075–1108 2018.00 0.14 3.50 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1424_1452_+ 1424–1452 1730.00 0.12 3.00 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1075_+ 1048–1075 2562.00 0.18 4.45 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2673_+ 2631–2673 1292.00 0.09 2.24 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1049_1079_+ 1049–1079 2259.00 0.16 3.92 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_157_198_+ 157–198 311.00 0.02 0.54 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_160_197_+ 160–197 564.00 0.04 0.98 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1048_1086_+ 1048–1086 1324.00 0.09 2.30 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2890_2925_+ 2890–2925 18567.00 1.32 32.22 86.66 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2898_2925_+ 2898–2925 57706.00 4.12 100.14 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_363_440_+ 363–440 22850.00 1.63 39.65 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2631_2707_+ 2631–2707 40763.00 2.91 70.74 97.37 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2172_2243_+ 2172–2243 93417.00 6.66 162.12 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_400_440_+ 400–440 724.00 0.05 1.26 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1391_1452_+ 1391–1452 1944.00 0.14 3.37 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_2858_2925_+ 2858–2925 25406.00 1.81 44.09 100.0 GAS5-230 retained intron heart (Tissue)
ENST00000650796.1 ENST00000650796.1_1641_1722_+ 1641–1722 1.00 0.00 0.00 100.0 GAS5-230 retained intron heart (Tissue)