ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000625572.1 ENST00000625572.1_23_92_+ 23–92 2243.00 68.72 3.89 100.0 ENST00000625572 miRNA heart (Tissue)
ENST00000628177.1 ENST00000628177.1_1_79_+ 1–79 21882.00 86.43 37.97 100.0 ENST00000628177 snoRNA heart (Tissue)
ENST00000630615.1 ENST00000630615.1_10_70_+ 10–70 3605.00 91.40 6.26 100.0 ENST00000630615 snoRNA heart (Tissue)
ENST00000635183.1 ENST00000635183.1_1617_1632_+ 1617–1632 192.00 29.81 0.33 100.0 DMRT2-209 protein coding heart (Tissue)
ENST00000635183.1 ENST00000635183.1_323_334_+ 323–334 323.00 50.16 0.56 100.0 DMRT2-209 protein coding heart (Tissue)
ENST00000636377.1 ENST00000636377.1_38_65_+ 38–65 2012.00 25.73 3.49 100.0 SNORD98-201 snoRNA heart (Tissue)
ENST00000636377.1 ENST00000636377.1_2_65_+ 2–65 4420.00 56.53 7.67 100.0 SNORD98-201 snoRNA heart (Tissue)
ENST00000636668.1 ENST00000636668.1_3209_3232_+ 3209–3232 119769.83 48.40 207.85 52.98 MIR106AHG-201 lncRNA heart (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3393_+ 3371–3393 3453.34 1.40 5.99 48.25 MIR106AHG-201 lncRNA heart (Tissue)
ENST00000636668.1 ENST00000636668.1_2902_2924_+ 2902–2924 250.00 0.10 0.43 100.0 MIR106AHG-201 lncRNA heart (Tissue)
ENST00000636668.1 ENST00000636668.1_3371_3391_+ 3371–3391 3648.24 1.47 6.33 50.97 MIR106AHG-201 lncRNA heart (Tissue)
ENST00000638012.2 ENST00000638012.2_1_28_+ 1–28 9224.00 70.66 16.01 100.0 MEG8-222 lncRNA heart (Tissue)
ENST00000638012.2 ENST00000638012.2_1_70_+ 1–70 1285.00 9.84 2.23 100.0 MEG8-222 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_7388_7482_+ 7388–7482 23251.00 12.70 40.35 92.76 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4215_+ 4125–4215 65913.00 35.99 114.38 93.83 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_9465_9551_+ 9465–9551 29744.00 16.24 51.62 100.0 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_5267_5357_+ 5267–5357 15002.00 8.19 26.03 91.55 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_4125_4168_+ 4125–4168 1793.00 0.98 3.11 100.0 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_7389_7479_+ 7389–7479 6339.00 3.46 11.00 52.58 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_288_349_+ 288–349 4005.00 2.19 6.95 75.82 SNHG14-224 lncRNA heart (Tissue)
ENST00000640631.2 ENST00000640631.2_287_352_+ 287–352 3332.00 1.82 5.78 56.88 SNHG14-224 lncRNA heart (Tissue)
ENST00000648813.1 ENST00000648813.1_104_120_+ 104–120 571.96 25.05 0.99 74.77 5S_rRNA.20-201 rRNA pseudogene heart (Tissue)
ENST00000649692.2 ENST00000649692.2_3826_3892_+ 3826–3892 817.00 5.10 1.42 100.0 HSPA9-211 retained intron heart (Tissue)
ENST00000649692.2 ENST00000649692.2_1755_1822_+ 1755–1822 5904.00 36.85 10.25 54.8 HSPA9-211 retained intron heart (Tissue)
ENST00000650189.1 ENST00000650189.1_167_187_+ 167–187 56774.00 75.22 98.53 100.0 DNM3OS-205 lncRNA heart (Tissue)