ENCFF001RMK

Library Details

Organism: Homo Sapiens
Biosample: heart (Tissue)
GEO DB ID: Not available
ENCODE Experiment ID: ENCSR000AFT
Description: Part of ENCODE experiment ENCSR000AFT. The libraries contained in this experiment come from human fetal heart tissue from independent donors. They are stranded SE101 Illumina Hi-Seq RNA-Seq libraries from rRNA-depleted Total RNA < 200 nucleotides in size
Author: Thomas Gingeras, CSHL

sncRNAs in this Library

Precursor Transcript ID sncRNA Name sncRNA position in precursor Expression Expression Fraction Expression (CPM) Prominence Transcript Name Transcript Type Biosample
ENST00000597420.2 ENST00000597420.2_241_263_+ 241–263 679.00 84.45 1.18 100.0 ENST00000597420 lncRNA heart (Tissue)
ENST00000600027.5 ENST00000600027.5_434_519_+ 434–519 66.00 2.13 0.11 100.0 RPS11-206 retained intron heart (Tissue)
ENST00000600027.5 ENST00000600027.5_441_519_+ 441–519 2065.00 66.53 3.58 100.0 RPS11-206 retained intron heart (Tissue)
ENST00000602315.3 ENST00000602315.3_752_771_+ 752–771 299235.00 42.42 519.29 45.5 CARMN-209 lncRNA heart (Tissue)
ENST00000602478.2 ENST00000602478.2_671_758_+ 671–758 1573.00 38.52 2.73 100.0 ENST00000602478 lncRNA heart (Tissue)
ENST00000604535.1 ENST00000604535.1_1396_1410_+ 1396–1410 28.00 13.66 0.05 100.0 PPFIA1P1-201 processed pseudogene heart (Tissue)
ENST00000606412.1 ENST00000606412.1_4_67_+ 4–67 3520.00 60.43 6.11 100.0 SNORD114-21-201 snoRNA heart (Tissue)
ENST00000606412.1 ENST00000606412.1_35_67_+ 35–67 942.00 16.17 1.63 100.0 SNORD114-21-201 snoRNA heart (Tissue)
ENST00000606510.1 ENST00000606510.1_2_82_+ 2–82 2250.00 46.86 3.90 100.0 SNORD115-40-201 snoRNA heart (Tissue)
ENST00000606724.1 ENST00000606724.1_22_43_+ 22–43 13291.00 98.66 23.07 100.0 MIR98-201 miRNA heart (Tissue)
ENST00000607261.1 ENST00000607261.1_3_73_+ 3–73 14288.00 94.12 24.80 100.0 SNORD113-5-201 snoRNA heart (Tissue)
ENST00000607334.3 ENST00000607334.3_14_34_+ 14–34 6165.00 92.17 10.70 100.0 MIR15A-201 miRNA heart (Tissue)
ENST00000607441.3 ENST00000607441.3_43_63_+ 43–63 415.00 77.57 0.72 100.0 MIR376C-201 miRNA heart (Tissue)
ENST00000607520.2 ENST00000607520.2_5465_5487_+ 5465–5487 863.00 58.55 1.50 100.0 SNHG21-206 retained intron heart (Tissue)
ENST00000607707.1 ENST00000607707.1_5_84_+ 5–84 81.00 10.57 0.14 100.0 SNORD11B-201 snoRNA heart (Tissue)
ENST00000608459.2 ENST00000608459.2_31_111_+ 31–111 2974.00 62.89 5.16 100.0 SNORD91B-201 snoRNA heart (Tissue)
ENST00000609620.2 ENST00000609620.2_7_86_+ 7–86 20266.00 61.98 35.17 82.59 SNORD91A-201 snoRNA heart (Tissue)
ENST00000612171.2 ENST00000612171.2_4_25_+ 4–25 108225.00 47.78 187.81 98.22 MIR486-1-201 miRNA heart (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1597_+ 1528–1597 7822.00 12.41 13.57 55.09 NOP56-219 retained intron heart (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1583_+ 1528–1583 753.00 1.19 1.31 100.0 NOP56-219 retained intron heart (Tissue)
ENST00000612233.1 ENST00000612233.1_1528_1555_+ 1528–1555 6079.00 9.64 10.55 100.0 NOP56-219 retained intron heart (Tissue)
ENST00000612233.1 ENST00000612233.1_1212_1282_+ 1212–1282 33142.00 52.57 57.51 87.67 NOP56-219 retained intron heart (Tissue)
ENST00000612463.1 ENST00000612463.1_1_83_+ 1–83 2452.00 18.12 4.26 53.26 RNA5-8SN2-201 rRNA heart (Tissue)
ENST00000612463.1 ENST00000612463.1_81_123_+ 81–123 114.10 0.84 0.20 57.34 RNA5-8SN2-201 rRNA heart (Tissue)
ENST00000612463.1 ENST00000612463.1_1_50_+ 1–50 9.00 0.07 0.02 100.0 RNA5-8SN2-201 rRNA heart (Tissue)